RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 DBIP07108 87 aaKnown RBP6.75□□□□□ -1.33
LSM8-204ENST00000424702 TNFRSF1BP20333 461 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 DCTP40126 519 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 ZNF41P51814 821 aaPredicted RBP6.75□□□□□ -1.33
LSM8-204ENST00000424702 FOXK2Q01167 660 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 LAPTM4AQ15012 233 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 FAM111BQ6SJ93 734 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 SHISA6Q6ZSJ9 500 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 HIST3H2AQ7L7L0 130 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 SLC15A4Q8N697 577 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 FAM86B1Q8N7N1 296 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 PAPD5Q8NDF8 572 aaKnown RBP6.75□□□□□ -1.33
LSM8-204ENST00000424702 OR52P1PQ8NH57 321 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 HIST1H2ACQ93077 130 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 C16orf58Q96GQ5 468 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 ALPK1Q96QP1 1244 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 TREX2Q9BQ50 279 aaPredicted RBP6.75□□□□□ -1.33
LSM8-204ENST00000424702 TAPBPLQ9BX59 468 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 MTHFD2LQ9H903 347 aaPredicted RBP6.75□□□□□ -1.33
LSM8-204ENST00000424702 GIN1Q9NXP7 522 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 TCFL5Q9UL49 500 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 MKLN1Q9UL63 735 aa6.75□□□□□ -1.33
LSM8-204ENST00000424702 SAGE2PA6NJ88 616 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ARGFXA6NJG6 315 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 AKAP8O43823 692 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 FAM20BO75063 409 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 TNFRSF21O75509 655 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 SNAP29O95721 258 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 GP1BBP13224 206 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ETS2P15036 469 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 SLC6A8P48029 635 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 NR0B1P51843 470 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 BLMHQ13867 455 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ERV3-1Q14264 604 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 FLYWCH1Q4VC44 716 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 AGAP7PQ5VUJ5 663 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 CDCP2Q5VXM1 449 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 HMBOX1Q6NT76 420 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 SHQ1Q6PI26 577 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 MARVELD2Q8N4S9 558 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 OR52R1Q8NGF1 315 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZNF675Q8TD23 568 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZCCHC14Q8WYQ9 949 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZNF597Q96LX8 424 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 AGAP4Q96P64 663 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZNF300Q96RE9 604 aaPredicted RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 CHCHD3Q9NX63 227 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 KLF13Q9Y2Y9 288 aaPredicted RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 SNTNA6NMZ2 147 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 CDK2AP1O14519 115 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 FGF17O60258 216 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 TPST2O60704 377 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 IFI6P09912 130 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 POU2F1P14859 743 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 TRHRP34981 398 aaPredicted RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 TBC1D25Q3MII6 688 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 COLEC12Q5KU26 742 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 FAM69BQ5VUD6 431 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 HMGN2P46Q86SG4 172 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZNF605Q86T29 641 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 LINC00471Q8N535 108 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 CDS1Q92903 461 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 OTULINQ96BN8 352 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 LRRC46Q96FV0 321 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 JSRP1Q96MG2 331 aaPredicted RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 CSF3RQ99062 836 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 STACQ99469 402 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 EPYCQ99645 322 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 MRPS26Q9BYN8 205 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 PRRG4Q9BZD6 226 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 OR10A5Q9H207 317 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 TOR3AQ9H497 397 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 PAPOLBQ9NRJ5 636 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 P4HTMQ9NXG6 502 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 MAT2BQ9NZL9 334 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 H2AFY2Q9P0M6 372 aaPredicted RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 POFUT2Q9Y2G5 429 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 YARS2Q9Y2Z4 477 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 UNC13CQ8NB66 2214 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 PTGES3LE9PB15 166 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 H0YAE9 185 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 CASC3O15234 703 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZNF28P17035 718 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 PGCP20142 388 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ATP6V1E1P36543 226 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 STAT5AP42229 794 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 ST3GAL3Q11203 375 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 EXOSC7Q15024 291 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 DEFB109BQ30KR1 87 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 CRB2Q5IJ48 1285 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 CDC73Q6P1J9 531 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 BPIFB6Q8NFQ5 453 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 DIO2Q92813 273 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 TAMM41Q96BW9 452 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 THOC3Q96J01 351 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 SGCZQ96LD1 299 aa6.74□□□□□ -1.33
LSM8-204ENST00000424702 TRNT1Q96Q11 434 aaKnown RBP6.74□□□□□ -1.33
LSM8-204ENST00000424702 ZNF717Q9BY31 904 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms