RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 FAM221AA4D161 298 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 RCBTB2O95199 551 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 IL18BPO95998 194 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 TMIGD3P0DMS9 266 aaPredicted RBP16.71■□□□□ 0.27
NUP50-207ENST00000424634 EFNA1P20827 205 aaPredicted RBP16.71■□□□□ 0.27
NUP50-207ENST00000424634 OPRM1P35372 400 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 RFX3P48380 749 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 DGKQP52824 942 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 CLDN15P56746 228 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 STX5Q13190 355 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 ZNHIT3Q15649 155 aaPredicted RBP16.71■□□□□ 0.27
NUP50-207ENST00000424634 WDR93Q6P2C0 686 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 OR6Y1Q8NGX8 325 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 AGR3Q8TD06 166 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 NUDT8Q8WV74 236 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 WNT2BQ93097 391 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 CAVIN3Q969G5 261 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 C3orf30Q96M34 536 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 FAM120CQ9NX05 1096 aaKnown RBP16.71■□□□□ 0.27
NUP50-207ENST00000424634 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.71■□□□□ 0.27
NUP50-207ENST00000424634 ZDHHC2Q9UIJ5 367 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 ABCG2Q9UNQ0 655 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 TMED5Q9Y3A6 229 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 V9GYY5 206 aaPredicted RBP16.71■□□□□ 0.27
NUP50-207ENST00000424634 MED13LQ71F56 2210 aa16.71■□□□□ 0.27
NUP50-207ENST00000424634 ABCA4P78363 2273 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 TYROBPO43914 113 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 NKX2-2O95096 273 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 UTS2O95399 124 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 TGM6O95932 706 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 GPC1P35052 558 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 PRKAG1P54619 331 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 MANFP55145 182 aaKnown RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 BCL2A1Q16548 175 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 GRAMD1BQ3KR37 738 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 XKR7Q5GH72 579 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 EMBQ6PCB8 327 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 NUP43Q8NFH3 380 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 OR5M1Q8NGP8 315 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 GPR151Q8TDV0 419 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 INTS12Q96CB8 462 aaKnown RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 ZBED6CLQ96FA7 236 aaPredicted RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 TM9SF2Q99805 663 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 EML4Q9HC35 981 aaKnown RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 SDHAF3Q9NRP4 125 aa16.7■□□□□ 0.26
NUP50-207ENST00000424634 ACSS1Q9NUB1 689 aaPredicted RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 DNAJB12Q9NXW2 375 aaKnown RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 MRTO4Q9UKD2 239 aaKnown RBP16.7■□□□□ 0.26
NUP50-207ENST00000424634 TTC36A6NLP5 189 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 EEF1E1-BLOC1S5C9J1V9 151 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 EEF1E1O43324 174 aaKnown RBP16.69■□□□□ 0.26
NUP50-207ENST00000424634 PEX11AO75192 247 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 SLU7O95391 586 aaKnown RBP16.69■□□□□ 0.26
NUP50-207ENST00000424634 BPGMP07738 259 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 ACP2P11117 423 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 HK1P19367 917 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 DNAJA1P31689 397 aaKnown RBP16.69■□□□□ 0.26
NUP50-207ENST00000424634 ETV4P43268 484 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 FLYWCH1Q4VC44 716 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 GALNT10Q86SR1 603 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 SLC16A11Q8NCK7 471 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 OR7A2PQ8NGA2 310 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 CEP70Q8NHQ1 597 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 ZFP28Q8NHY6 868 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 FAM110BQ8TC76 370 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 RMND5BQ96G75 393 aaPredicted RBP16.69■□□□□ 0.26
NUP50-207ENST00000424634 C16orf58Q96GQ5 468 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
NUP50-207ENST00000424634 TMEM109Q9BVC6 243 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 LIME1Q9H400 295 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 C3orf14Q9HBI5 128 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 ATP6V1HQ9UI12 483 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 FOXD3Q9UJU5 478 aaPredicted RBP16.69■□□□□ 0.26
NUP50-207ENST00000424634 ZNF337Q9Y3M9 751 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 ITPR3Q14573 2671 aa16.69■□□□□ 0.26
NUP50-207ENST00000424634 H0YC42 278 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 HCRTR2O43614 444 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 KCNH1O95259 989 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 PEX19P40855 299 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 ASMTP46597 345 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 SUCLG1P53597 346 aaKnown RBP16.68■□□□□ 0.26
NUP50-207ENST00000424634 TPD52P55327 224 aaPredicted RBP16.68■□□□□ 0.26
NUP50-207ENST00000424634 PRR5P85299 388 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 EXOSC6Q5RKV6 272 aaKnown RBP16.68■□□□□ 0.26
NUP50-207ENST00000424634 C6orf136Q5SQH8 315 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 ZAR1Q86SH2 424 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 GCNT2Q8N0V5 402 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 CDRT4Q8N9R6 151 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 OR4C3Q8NH37 302 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 LINC01560Q8TB33 94 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 FBXO30Q8TB52 745 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 FAM222BQ8WU58 562 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 SLC9A6Q92581 669 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 MTERF3Q96E29 417 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 C1GALT1C1Q96EU7 318 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 DTNBP1Q96EV8 351 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 LRRC46Q96FV0 321 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 PPP3R2Q96LZ3 170 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 ZFP3Q96NJ6 502 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 RASSF1Q9NS23 344 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms