RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 G3V4G9 280 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 AP3B1O00203 1094 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ACOX3O15254 700 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 AIFM1O95831 613 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 CLPSP04118 112 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 CRYBA1P05813 215 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SLC35E2BP0CK96 405 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SLC35E2P0CK97 266 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SAGP10523 405 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ANPEPP15144 967 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 GIFP27352 417 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SERPINF1P36955 418 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SLC1A3P43003 542 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 CLK3P49761 638 aaKnown RBP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 IL2P60568 153 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ZP4Q12836 540 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 EFR3AQ14156 821 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 RNPS1Q15287 305 aaKnown RBP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 PPP1R3AQ16821 1122 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TUSC1Q2TAM9 212 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ADNP2Q6IQ32 1131 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 C11orf87Q6NUJ2 197 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SYT10Q6XYQ8 523 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 LARP4Q71RC2 724 aaKnown RBP eCLIP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TDRPQ86YL5 185 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 DENND6AQ8IWF6 608 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ZNF100Q8IYN0 542 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 CCDC116Q8IYX3 515 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 KIR3DL3Q8N743 410 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ZNF511Q8NB15 262 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 C17orf47Q8NEP4 570 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 OR7G1Q8NGA0 311 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 OR2V1Q8NHB1 315 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 FAM110BQ8TC76 370 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ABHD3Q8WU67 409 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SGCDQ92629 289 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TMIGD2Q96BF3 282 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 WWC2-AS2Q96NR7 200 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 HBEGFQ99075 208 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 DNAJC7Q99615 494 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SORBS1Q9BX66 1292 aaKnown RBP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 EHD1Q9H4M9 534 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 CXorf21Q9HAI6 301 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 BEX1Q9HBH7 125 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TIGARQ9NQ88 270 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TAS2R13Q9NYV9 303 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TREM2Q9NZC2 230 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 KLHL13Q9P2N7 655 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 TESQ9UGI8 421 aaKnown RBP5.54□□□□□ -1.52
SDCBP-203ENST00000424270 VDAC3Q9Y277 283 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SH3PXD2BA1X283 911 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 OR6C70A6NIJ9 312 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 SLC22A31A6NKX4 558 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 C17orf51A8MQB3 221 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 TGFB1P01137 390 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 TFP02787 698 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 ENO2P09104 434 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 ARNTP27540 789 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 FEN1P39748 380 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 GPR6P46095 362 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 IDH3GP51553 393 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 TERF1P54274 439 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 NAP1L1P55209 391 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 CARD18P57730 90 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 RAB10P61026 200 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 BASP1P80723 227 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 MRPS22P82650 360 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 MAP4K2Q12851 820 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 DDX39BQ13838 428 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 DHX34Q14147 1143 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 EXOSC7Q15024 291 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 STX1AQ16623 288 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 ADPRMQ3LIE5 342 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 TMEM35AQ53FP2 167 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 PAGE2BQ5JRK9 111 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 SH2D4BQ5SQS7 431 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 DCAF12L2Q5VW00 463 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 OR4C11Q6IEV9 310 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 PAQR3Q6TCH7 311 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 SLCO4C1Q6ZQN7 724 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 Q6ZT83 130 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 TBC1D1Q86TI0 1168 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 GGNQ86UU5 652 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 ZNF615Q8N8J6 731 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 CDYL2Q8N8U2 506 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 OR2M3Q8NG83 312 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 CLDND2Q8NHS1 167 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 UBASH3BQ8TF42 649 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 NEU4Q8WWR8 484 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 WFDC12Q8WWY7 111 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 GTF3AQ92664 365 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 OSTF1Q92882 214 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 EFHD2Q96C19 240 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 CCDC42Q96M95 316 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 GPA33Q99795 319 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 CAPS2Q9BXY5 557 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 TSGA10Q9BZW7 698 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 NAT10Q9H0A0 1025 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 ACSS1Q9NUB1 689 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms