RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 KCTD20Q7Z5Y7 419 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 MEX3DQ86XN8 651 aaKnown RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 OR8H2Q8N162 312 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 PQLC3Q8N755 202 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 NIPA2Q8N8Q9 360 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 NEIL3Q8TAT5 605 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 SLC22A8Q8TCC7 542 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 TFB1MQ8WVM0 346 aaKnown RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 WDR60Q8WVS4 1066 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 ST8SIA4Q92187 359 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 TSLPQ969D9 159 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 UCN3Q969E3 161 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 NTNG2Q96CW9 530 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 C7orf26Q96N11 449 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 QRFPRQ96P65 431 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 RNF157Q96PX1 679 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 FAM111AQ96PZ2 611 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 OR2A5Q96R48 311 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 VAT1Q99536 393 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 EBNA1BP2Q99848 306 aaKnown RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 RHNO1Q9BSD3 238 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 CHODLQ9H9P2 273 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 ABCF3Q9NUQ8 709 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF701Q9NV72 531 aaPredicted RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 KLHL28Q9NXS3 571 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 TAB2Q9NYJ8 693 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 RSPH14Q9UHP6 348 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 TTC7AQ9ULT0 858 aaPredicted RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 BOKQ9UMX3 212 aaPredicted RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 LAMP3Q9UQV4 416 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 NINQ8N4C6 2090 aa4.4□□□□□ -1.71
SFXN1-202ENST00000421887 YLPM1P49750 1951 aaKnown RBP4.4□□□□□ -1.71
SFXN1-202ENST00000421887 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 A0A1W2PPH5 198 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 A8MUA0 341 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 DEFB108AA8MXU0 73 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 J3KTA2 159 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PSMD12O00232 456 aaPredicted RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PSMD9O00233 223 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 CCL22O00626 93 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 EPHB6O15197 1021 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 KIF5CO60282 957 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 LMX1BO60663 402 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 AVILO75366 819 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 RDH16O75452 317 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ANXA9O76027 345 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ZFAND5O76080 213 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 MYO1DO94832 1006 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PLGP00747 810 aaPredicted RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 AGTP01019 485 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 FHP07954 510 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 FGF2P09038 288 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 APEHP13798 732 aaKnown RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 CRYGSP22914 178 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 CYLC1P35663 651 aaPredicted RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ACVR1BP36896 505 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PPARGP37231 505 aaPredicted RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 DNASE1L1P49184 302 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PRKAG1P54619 331 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 GEMP55040 296 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ACTG1P63261 375 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 EEF1A1P68104 462 aaKnown RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 RHAGQ02094 409 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 RELAQ04206 551 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 TBL3Q12788 808 aaKnown RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PRPSAP1Q14558 356 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ITIH4Q14624 930 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 CCNG2Q16589 344 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 P3H1Q32P28 736 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 FAM174BQ3ZCQ3 159 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 EEF1A1P5Q5VTE0 462 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 NSUN5P2Q63ZY6 315 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 CYB5R2Q6BCY4 276 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 SCIMPQ6UWF3 145 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 SUSD1Q6UWL2 747 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PRSS41Q7RTY9 318 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 SPARTQ8N0X7 666 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 RFLNBQ8N5W9 214 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PLD5Q8N7P1 536 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 B3GNT7Q8NFL0 401 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 HMGCLL1Q8TB92 370 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ZCCHC10Q8TBK6 192 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 IGFBPL1Q8WX77 278 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 SMPDL3AQ92484 453 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 VMP1Q96GC9 406 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ZC3HAV1LQ96H79 300 aaKnown RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 JSRP1Q96MG2 331 aaPredicted RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 ZFP3Q96NJ6 502 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 WFIKKN1Q96NZ8 548 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 FCRL5Q96RD9 977 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 C19orf43Q9BQ61 176 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 FERMT1Q9BQL6 677 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 SFXN3Q9BWM7 321 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PAIP1Q9H074 479 aaKnown RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 PIGMQ9H3S5 423 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 KRT84Q9NSB2 600 aa4.39□□□□□ -1.71
SFXN1-202ENST00000421887 TRMT1Q9NXH9 659 aaKnown RBP4.39□□□□□ -1.71
SFXN1-202ENST00000421887 NDUFAF4Q9P032 175 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms