RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 THBS1P07996 1170 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CT45A8P0DMV1 189 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CT45A9P0DMV2 189 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CDH2P19022 906 aaPredicted RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 ELAVL4P26378 380 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 ELK4P28324 431 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CLK3P49761 638 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 SEC23BQ15437 767 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CT45A2Q5DJT8 189 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 RBM48Q5RL73 367 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 PHF19Q5T6S3 580 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 TMEM151BQ8IW70 566 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 PEX5LQ8IYB4 626 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 ALDH16A1Q8IZ83 802 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 ZNF321PQ8N8H1 164 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 SENP5Q96HI0 755 aaPredicted RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 PRR14Q9BWN1 585 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 MKKSQ9NPJ1 570 aaPredicted RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 TMEM9BQ9NQ34 198 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 SEMA4GQ9NTN9 838 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 KIF17Q9P2E2 1029 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 NCDNQ9UBB6 729 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 RARRES3Q9UL19 164 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 HCN4Q9Y3Q4 1203 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 PCDHGA8Q9Y5G5 932 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 IGLV3-12A0A075B6K2 115 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 PEX12O00623 359 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 UGT2B17O75795 530 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 SOX30O94993 753 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CCNB2O95067 398 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 H1F0P07305 194 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 ANXA8P13928 327 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 CBLP22681 906 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 ACP1P24666 158 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 PLAURQ03405 335 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 LSAMPQ13449 338 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 IL18R1Q13478 541 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 MFSD4BQ5TF39 518 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 ZNF385CQ66K41 422 aaPredicted RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 GPR141Q7Z602 305 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 HDAC2Q92769 488 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 GABARAPL3Q9BY60 117 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 TGIF2Q9GZN2 237 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 VN1R1Q9GZP7 353 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 RIBC2Q9H4K1 309 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 POLE3Q9NRF9 147 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 PNO1Q9NRX1 252 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 NPIPA5A0A0B4J1W7 369 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 A0A1W2PRQ8 180 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 NPIPA7E9PJI5 369 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 GDF9O60383 454 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 SCRG1O75711 98 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 IGKV3-11P04433 115 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 GUSBP08236 651 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 NPIPA8P0DM63 369 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 CYP4B1P13584 511 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 TNNI3P19429 210 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 FOXL2P58012 376 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 IL1RL1Q01638 556 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 DGCR6Q14129 220 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 ZBED5Q49AG3 693 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 ZNF691Q5VV52 312 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 SLC7A13Q8TCU3 470 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 PRRC1Q96M27 445 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 SLC24A3Q9HC58 644 aa19.43■□□□□ 0.7
GPC1-202ENST00000420138 RSL24D1Q9UHA3 163 aaKnown RBP19.43■□□□□ 0.7
GPC1-202ENST00000420138 DDAH2O95865 285 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 GASTP01350 101 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 CD59P13987 128 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 IL7RP16871 459 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 TRHRP34981 398 aaPredicted RBP19.42■□□□□ 0.7
GPC1-202ENST00000420138 SLC37A1P57057 533 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 ISL1P61371 349 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 ROR2Q01974 943 aaKnown RBP19.42■□□□□ 0.7
GPC1-202ENST00000420138 FOXD4Q12950 439 aaPredicted RBP19.42■□□□□ 0.7
GPC1-202ENST00000420138 ZNHIT3Q15649 155 aaPredicted RBP19.42■□□□□ 0.7
GPC1-202ENST00000420138 LAIR2Q6ISS4 152 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 PRSS58Q8IYP2 241 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 BMPERQ8N8U9 685 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 OR7G1Q8NGA0 311 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 PMM1Q92871 262 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 ITPAQ9BY32 194 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 FAM86C1Q9NVL1 165 aa19.42■□□□□ 0.7
GPC1-202ENST00000420138 NDRG4Q9ULP0 352 aaKnown RBP19.42■□□□□ 0.7
GPC1-202ENST00000420138 A8MUA0 341 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 BCKDKO14874 412 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 UGT2B11O75310 529 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 ONECUT2O95948 504 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 DBIP07108 87 aaKnown RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 GP1BAP07359 652 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 NID1P14543 1247 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 RPS6KA3P51812 740 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 NPRL3Q12980 569 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 TRA2AQ13595 282 aaKnown RBP eCLIP19.41■□□□□ 0.7
GPC1-202ENST00000420138 RAPSNQ13702 412 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 KEAP1Q14145 624 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 ELAVL1Q15717 326 aaKnown RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 CSRP2Q16527 193 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 NKAIN1Q4KMZ8 207 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 FGD3Q5JSP0 725 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms