RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 FGF13Q92913 245 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 BADQ92934 168 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 DACT3Q96B18 629 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-202ENST00000418310 DHRS1Q96LJ7 313 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 RNF121Q9H920 327 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-202ENST00000418310 HINT3Q9NQE9 182 aaKnown RBP11.13□□□□□ -0.63
LIMK1-202ENST00000418310 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF780BQ9Y6R6 833 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SERPINI2O75830 405 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 EML2O95834 649 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SLC3A1Q07837 685 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 COX10Q12887 443 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 GAB4Q2WGN9 574 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 FIGNL1Q6PIW4 674 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 RPTNQ6XPR3 784 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 GDPGP1Q6ZNW5 385 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SYT9Q86SS6 491 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 PFN4Q8NHR9 129 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 CCL4L1Q8NHW4 92 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 GRHL3Q8TE85 626 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SLC7A6Q92536 515 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 OR2B2Q9GZK3 357 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 PRDM7Q9NQW5 492 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 FBXO34Q9NWN3 711 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 TRAPPC4Q9Y296 219 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 ASB4Q9Y574 426 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SPTBN5Q9NRC6 3674 aaKnown RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CXorf51AA0A1B0GTR3 108 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 C12orf71A8MTZ7 269 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 H0Y8X5 98 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 NDUFB5O43674 189 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 LDB3O75112 727 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 PAHP00439 452 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 THY1P04216 161 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF888P0CJ79 500 aaPredicted RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CLUP10909 449 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ACADMP11310 421 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 MPIP34949 423 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 GAS1P54826 345 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SRSF5Q13243 272 aaKnown RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SGCGQ13326 291 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 TANGO2Q6ICL3 276 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 XKRXQ6PP77 449 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF765Q7L2R6 523 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 VWA5B2Q8N398 1253 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 OR7G2Q8NG99 324 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 OR51L1Q8NGJ5 315 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 OR51A7Q8NH64 312 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 GNPDA2Q8TDQ7 276 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SLC35A4Q96G79 324 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SLC41A3Q96GZ6 507 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CITED4Q96RK1 184 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 HCAR1Q9BXC0 346 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 KLHL28Q9NXS3 571 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 COL4A3Q01955 1670 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CLEC3AO75596 197 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 IFI30P13284 250 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ENDOUP21128 410 aaKnown RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 TBXA2RP21731 343 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 PAICSP22234 425 aaKnown RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CPN2P22792 545 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 IFNA8P32881 189 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ACVR1BP36896 505 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 FRKP42685 505 aaPredicted RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 MAP2K3P46734 347 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ST3GAL3Q11203 375 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 RAB40BQ12829 278 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 RPA4Q13156 261 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CST6Q15828 149 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 TMEM52BQ4KMG9 183 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 C3orf38Q5JPI3 329 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 QSOX2Q6ZRP7 698 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 KRT74Q7RTS7 529 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF438Q7Z4V0 828 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 YIPF7Q8N8F6 280 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 OR2L3Q8NG85 312 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ELP4Q96EB1 424 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SENP5Q96HI0 755 aaPredicted RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 RBCK1Q9BYM8 510 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 NDOR1Q9UHB4 597 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 FBXL4Q9UKA2 621 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 ITGB1BP2Q9UKP3 347 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SLC27A6Q9Y2P4 619 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 SF3B6Q9Y3B4 125 aaKnown RBP11.12□□□□□ -0.63
LIMK1-202ENST00000418310 WDR45Q9Y484 360 aa11.12□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3DA0A087WVF3 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3IA0A087WXS9 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3EA0A087X179 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3KA0A087X1G2 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3FA6NER0 549 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 LRRC72A6NJI9 287 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3LB9A6J9 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 KAT7O95251 611 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3HP0C7X1 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 CHRNB1P11230 501 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 DRD2P14416 443 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms