RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 RGS14O43566 566 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 TBX19O60806 448 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 IL33O95760 270 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 IFI6P09912 130 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 ACP2P11117 423 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 NEFHP12036 1026 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 CTSSP25774 331 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 KIR2DL3P43628 341 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 RFX3P48380 749 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 PSPHP78330 225 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 RCAN2Q14206 197 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 GALNTL6Q49A17 601 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 CYP27C1Q4G0S4 372 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 EXOSC6Q5RKV6 272 aaKnown RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 MARCH3Q86UD3 253 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 EXOC3L1Q86VI1 746 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 OR4K17Q8NGC6 315 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 TCP10LQ8TDR4 215 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 OTUB1Q96FW1 271 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 RMND5BQ96G75 393 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 C3orf30Q96M34 536 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 UCN2Q96RP3 112 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 TRMOQ9BU70 441 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 REEP4Q9H6H4 257 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 Q9N2J8 555 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 SIRT3Q9NTG7 399 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 FAM120CQ9NX05 1096 aaKnown RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 MED11Q9P086 117 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 V9GYY5 206 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-203ENST00000416538 ACANP16112 2415 aa13.66□□□□□ -0.22
UBXN4-203ENST00000416538 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 NPHS1O60500 1241 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 TNFSF13O75888 250 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 UTS2O95399 124 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 IL18BPO95998 194 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 BCKDHAP12694 445 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 GABRA3P34903 492 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 DGKQP52824 942 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 SUCLG1P53597 346 aaKnown RBP13.65□□□□□ -0.22
UBXN4-203ENST00000416538 MRPS22P82650 360 aaKnown RBP13.65□□□□□ -0.22
UBXN4-203ENST00000416538 ENPP6Q6UWR7 440 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 SPNS3Q6ZMD2 512 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 DDIASQ8IXT1 998 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 OR6Y1Q8NGX8 325 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 INTS12Q96CB8 462 aaKnown RBP13.65□□□□□ -0.22
UBXN4-203ENST00000416538 PPCDCQ96CD2 204 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 NPAS1Q99742 590 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 FBXO34Q9NWN3 711 aa13.65□□□□□ -0.22
UBXN4-203ENST00000416538 DNAJB12Q9NXW2 375 aaKnown RBP13.65□□□□□ -0.22
UBXN4-203ENST00000416538 MRPS18CQ9Y3D5 142 aaKnown RBP13.65□□□□□ -0.22
UBXN4-203ENST00000416538 RAI1Q7Z5J4 1906 aaPredicted RBP13.64□□□□□ -0.23
UBXN4-203ENST00000416538 A0A1W2PPR1 153 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 A6NNC1 897 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 NKX2-2O95096 273 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 RCBTB2O95199 551 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 FGF4P08620 206 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 CHMP24386 653 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 ETV4P43268 484 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 IST1P53990 364 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 DSCR4P56555 118 aaPredicted RBP13.64□□□□□ -0.23
UBXN4-203ENST00000416538 PTGR1Q14914 329 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 DUSP5Q16690 384 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 DECR1Q16698 335 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 MFSD12Q6NUT3 480 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 UBQLNLQ8IYU4 475 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 SLC16A11Q8NCK7 471 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 LINC01560Q8TB33 94 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 WNT2BQ93097 391 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 C1orf50Q9BV19 199 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 POLDIP3Q9BY77 421 aaKnown RBP13.64□□□□□ -0.23
UBXN4-203ENST00000416538 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
UBXN4-203ENST00000416538 GALNT8Q9NY28 637 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 NTMQ9P121 344 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 TRAF6Q9Y4K3 522 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
UBXN4-203ENST00000416538 IGLV3-32A0A0A0MS00 114 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 OR2M5A3KFT3 312 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SCAMP2O15127 329 aaKnown RBP13.63□□□□□ -0.23
UBXN4-203ENST00000416538 TYROBPO43914 113 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 GMFGO60234 142 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SKAP2O75563 359 aaPredicted RBP13.63□□□□□ -0.23
UBXN4-203ENST00000416538 PRPS2P11908 318 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 HK1P19367 917 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 OPRM1P35372 400 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 GCKP35557 465 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 CLDN20P56880 219 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SF3B4Q15427 424 aaKnown RBP eCLIP13.63□□□□□ -0.231e-8■■■■□ 23
UBXN4-203ENST00000416538 TMEM44Q2T9K0 475 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 RAET1LQ5VY80 246 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 VWA1Q6PCB0 445 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 AAGABQ6PD74 315 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 SZRD1Q7Z422 152 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 LUZP2Q86TE4 346 aa13.63□□□□□ -0.23
UBXN4-203ENST00000416538 GRAMD2AQ8IUY3 354 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms