RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ZNF354AO60765 605 aaPredicted RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 ABCB7O75027 752 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 ENTPD5O75356 428 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 PPM1BO75688 479 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 OR2J2O76002 312 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 ALPPP05187 535 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 GPIP06744 558 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 THBS1P07996 1170 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 NGFRP08138 427 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 FBXO45P0C2W1 286 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 CD247P20963 164 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 KRT20P35900 424 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 EIF2S3P41091 472 aaKnown RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 ATP12AP54707 1039 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 SELENOWP63302 87 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 CDC20Q12834 499 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 FLYWCH1Q4VC44 716 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 LRRC23Q53EV4 343 aaPredicted RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 DHRS4L2Q6PKH6 230 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 C16orf47Q6ZP98 133 aaPredicted RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 SPATA24Q86W54 205 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 ARMC8Q8IUR7 673 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 PEX5LQ8IYB4 626 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 CLEC1AQ8NC01 280 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 THAP3Q8WTV1 239 aaPredicted RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 OMA1Q96E52 524 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 NAF1Q96HR8 494 aaKnown RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 PYURFQ96I23 114 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 LMF1Q96S06 567 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 RASL10BQ96S79 203 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 DOHHQ9BU89 302 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 LHPPQ9H008 270 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
SF3B1-204ENST00000414963 UBQLN4Q9NRR5 601 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 KCNE5Q9UJ90 142 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 POLHQ9Y253 713 aa13.13□□□□□ -0.31
SF3B1-204ENST00000414963 MASP2O00187 686 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 SUV39H1O43463 412 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 REM1O75628 298 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 UGT2B17O75795 530 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 PRKD3O94806 890 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 PABPC4LP0CB38 370 aaKnown RBP13.12□□□□□ -0.31
SF3B1-204ENST00000414963 TBXA2RP21731 343 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 PRKAR1BP31321 381 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 KCNJ5P48544 419 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 EFR3AQ14156 821 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 GPR68Q15743 365 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ZSWIM7Q19AV6 140 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ZNF791Q3KP31 576 aaPredicted RBP13.12□□□□□ -0.31
SF3B1-204ENST00000414963 KLHL26Q53HC5 615 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ATP1A1-AS1Q5TC04 95 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 IRAK1BP1Q5VVH5 260 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ZFP1Q6P2D0 407 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 OPN5Q6U736 354 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 NUP54Q7Z3B4 507 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 GALNT10Q86SR1 603 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ADGRG5Q8IZF4 528 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 PAPD5Q8NDF8 572 aaKnown RBP13.12□□□□□ -0.31
SF3B1-204ENST00000414963 OR4C3Q8NH37 302 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 RNF138Q8WVD3 245 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 TTC9Q92623 222 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 THOC3Q96J01 351 aaKnown RBP13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ZNF354BQ96LW1 612 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 ADOQ96SZ5 270 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 PINK1Q9BXM7 581 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 MAGIXQ9H6Y5 334 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 TRIM45Q9H8W5 580 aaPredicted RBP13.12□□□□□ -0.31
SF3B1-204ENST00000414963 CCM2LQ9NUG4 571 aaPredicted RBP13.12□□□□□ -0.31
SF3B1-204ENST00000414963 SEC14L3Q9UDX4 400 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
SF3B1-204ENST00000414963 DHRS12A0PJE2 317 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 H0YHG0 523 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 SYT5O00445 386 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 HS6ST1O60243 411 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 FKBP6O75344 327 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 ITGA10O75578 1167 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 UTS2O95399 124 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 ZNF682O95780 498 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 CYP4B1P13584 511 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 NID1P14543 1247 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 IL12BP29460 328 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 SLC7A1P30825 629 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 DCTP40126 519 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 ADH7P40394 386 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 TMED10P49755 219 aaKnown RBP13.11□□□□□ -0.31
SF3B1-204ENST00000414963 LARS2Q15031 903 aaKnown RBP13.11□□□□□ -0.31
SF3B1-204ENST00000414963 MAPK14Q16539 360 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 NTRK2Q16620 822 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 MEP1AQ16819 746 aa13.11□□□□□ -0.31
SF3B1-204ENST00000414963 DUSP7Q16829 419 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms