RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 Q6ZSR9 355 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 CHMP1BQ7LBR1 199 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 PPCDCQ96CD2 204 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 FOXC2Q99958 501 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 YIPF4Q9BSR8 244 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 TUBB1Q9H4B7 451 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 SDHAF3Q9NRP4 125 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 SH3BP4Q9P0V3 963 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 ABCG2Q9UNQ0 655 aa14.05□□□□□ -0.16
ACTB-202ENST00000414620 MRPS18CQ9Y3D5 142 aaKnown RBP14.05□□□□□ -0.16
ACTB-202ENST00000414620 NUP214P35658 2090 aaPredicted RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 A0A1W2PNV4 684 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 TMEM233B4DJY2 109 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 TNFSF13O75888 250 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.163e-14■■■■□ 21.3
ACTB-202ENST00000414620 UTS2O95399 124 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 IGKV1D-16P01601 117 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 CHRNGP07510 517 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 PEPDP12955 493 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 DNASE1P24855 282 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 SUCLG1P53597 346 aaKnown RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 SIRPAP78324 504 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 DAZAP2Q15038 168 aaPredicted RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 GRAMD1BQ3KR37 738 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 VWA1Q6PCB0 445 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 PAMR1Q6UXH9 720 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 EXOC3L1Q86VI1 746 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 DDIASQ8IXT1 998 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 MEIOBQ8N635 442 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 CNEP1R1Q8N9A8 125 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 EIF1ADQ8N9N8 165 aaKnown RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 AGR3Q8TD06 166 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 GPR151Q8TDV0 419 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 DUSP19Q8WTR2 217 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 FIG4Q92562 907 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 OTUB1Q96FW1 271 aaPredicted RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 APOPT1Q96IL0 206 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 MECRQ9BV79 373 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 TBL1XR1Q9BZK7 514 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 IQCGQ9H095 443 aaKnown RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 ACBD3Q9H3P7 528 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 PPCSQ9HAB8 311 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 FAM120CQ9NX05 1096 aaKnown RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 GIMAP2Q9UG22 337 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 BAIAP2L1Q9UHR4 511 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 MRTO4Q9UKD2 239 aaKnown RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
ACTB-202ENST00000414620 WBP11Q9Y2W2 641 aaKnown RBP14.04□□□□□ -0.16
ACTB-202ENST00000414620 HEATR5AQ86XA9 2040 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 OR2M5A3KFT3 312 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 SH3D21A4FU49 640 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 SLC22A20A6NK97 555 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 TRIM13O60858 407 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 SPAG7O75391 227 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 KCNH1O95259 989 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 PRPS2P11908 318 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 ALDH3A1P30838 453 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
ACTB-202ENST00000414620 PSMD4P55036 377 aaKnown RBP14.03□□□□□ -0.16
ACTB-202ENST00000414620 DIO3P55073 304 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 CLDN15P56746 228 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 GANABQ14697 944 aaKnown RBP14.03□□□□□ -0.16
ACTB-202ENST00000414620 RFTN2Q52LD8 501 aaPredicted RBP14.03□□□□□ -0.16
ACTB-202ENST00000414620 APOOLQ6UXV4 268 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 GATSQ8NAP1 163 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 NUP43Q8NFH3 380 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 ZFP28Q8NHY6 868 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 TWIST2Q8WVJ9 160 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 SLC9A6Q92581 669 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 C1GALT1C1Q96EU7 318 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 ZNF845Q96IR2 970 aaPredicted RBP14.03□□□□□ -0.16
ACTB-202ENST00000414620 FCRL1Q96LA6 429 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 FAM111AQ96PZ2 611 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 CCT7Q99832 543 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 PINK1Q9BXM7 581 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 CXXC4Q9H2H0 198 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 PIGMQ9H3S5 423 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 PTGES2Q9H7Z7 377 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 C3orf14Q9HBI5 128 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 ZNF337Q9Y3M9 751 aa14.03□□□□□ -0.16
ACTB-202ENST00000414620 HRNRQ86YZ3 2850 aaPredicted RBP14.02□□□□□ -0.16
ACTB-202ENST00000414620 NPIPB8E9PQR5 432 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 LSM1O15116 133 aaKnown RBP14.02□□□□□ -0.17
ACTB-202ENST00000414620 ANGPTL1O95841 491 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 CHEK2O96017 543 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 ACP2P11117 423 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 NEFHP12036 1026 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 CD99P14209 185 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 MANFP55145 182 aaKnown RBP14.02□□□□□ -0.17
ACTB-202ENST00000414620 CLDN20P56880 219 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 BCL2A1Q16548 175 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 PPP4R4Q6NUP7 873 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 FIGNL1Q6PIW4 674 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 ZCCHC23Q6ZST2 131 aa14.02□□□□□ -0.17
ACTB-202ENST00000414620 METTL2AQ96IZ6 378 aaKnown RBP14.02□□□□□ -0.17
ACTB-202ENST00000414620 OPN3Q9H1Y3 402 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms