RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TBC1D25Q3MII6 688 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 GCNT6Q5T4J0 391 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 QSOX2Q6ZRP7 698 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 TSEN54Q7Z6J9 526 aaKnown RBP9.27□□□□□ -0.93
DDB1-202ENST00000414411 ATG16L2Q8NAA4 619 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 LSM14AQ8ND56 463 aaKnown RBP9.27□□□□□ -0.93
DDB1-202ENST00000414411 CT55Q8WUE5 264 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 CNRIP1Q96F85 164 aaPredicted RBP9.27□□□□□ -0.93
DDB1-202ENST00000414411 PITX2Q99697 317 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 APOL4Q9BPW4 351 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 RBCK1Q9BYM8 510 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 VN1R1Q9GZP7 353 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 TMEM38AQ9H6F2 299 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 MIEF1Q9NQG6 463 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 SLC35C2Q9NQQ7 365 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 KRT84Q9NSB2 600 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 NXT1Q9UKK6 140 aaKnown RBP9.27□□□□□ -0.93
DDB1-202ENST00000414411 PSME2Q9UL46 239 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 MKL2Q9ULH7 1088 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 MMACHCQ9Y4U1 282 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 PCDHGB1Q9Y5G3 927 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 GMPPBQ9Y5P6 360 aa9.27□□□□□ -0.93
DDB1-202ENST00000414411 IGF2RP11717 2491 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 LOC101059948A0A1B0GTJ6 334 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 C21orf140B9A014 251 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 C9J4A7 227 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 E9PQ18 207 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 LIPCP11150 499 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 MAOAP21397 527 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 F8A1P23610 371 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 EPHA2P29317 976 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 ENTPD1P49961 510 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 XKP51811 444 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 PCBP4P57723 403 aaKnown RBP9.26□□□□□ -0.93
DDB1-202ENST00000414411 CXCR4P61073 352 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 SCARB2Q14108 478 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 TGIF1Q15583 401 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
DDB1-202ENST00000414411 FAM180BQ6P0A1 224 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 OR4N5Q8IXE1 308 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 OR4K14Q8NGD5 310 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 OR2Y1Q8NGV0 311 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 PTCHD1Q96NR3 888 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 GPR87Q9BY21 358 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 DGCR6LQ9BY27 220 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 GPN2Q9H9Y4 310 aaPredicted RBP9.26□□□□□ -0.93
DDB1-202ENST00000414411 NECTIN3Q9NQS3 549 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 PRTFDC1Q9NRG1 225 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 TAS2R9Q9NYW1 312 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 NDUFAF4Q9P032 175 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 FARSAQ9Y285 508 aaKnown RBP9.26□□□□□ -0.93
DDB1-202ENST00000414411 PCDHGB3Q9Y5G1 929 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 PCDHGA6Q9Y5G7 932 aa9.26□□□□□ -0.93
DDB1-202ENST00000414411 ANKRD11Q6UB99 2663 aaPredicted RBP9.26□□□□□ -0.93
DDB1-202ENST00000414411 URB1O60287 2271 aaKnown RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 IDSB3KWA1 339 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ADAMDEC1O15204 470 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 OPN1SWP03999 348 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 UMODP07911 640 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CYC1P08574 325 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ZNF182P17025 639 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 PPP2R1BP30154 601 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 RRM2P31350 389 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 FMO3P31513 532 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CASP9P55211 416 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 GP2P55259 537 aaKnown RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 SLC35A2P78381 396 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 EEF1A2Q05639 463 aaKnown RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 DUSP2Q05923 314 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SLC13A2Q13183 592 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 BIKQ13323 160 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ZNF750Q32MQ0 723 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 MINDY4Q4G0A6 757 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 FAM69BQ5VUD6 431 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SHISA6Q6ZSJ9 500 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CCDC80Q76M96 950 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TSPYL5Q86VY4 417 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 PRSS58Q8IYP2 241 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 NATD1Q8N6N6 113 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SUN3Q8TAQ9 357 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TBC1D15Q8TC07 691 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SPPL2AQ8TCT8 520 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 EXOSC8Q96B26 276 aaKnown RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 TAMM41Q96BW9 452 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 GABARAPL3Q9BY60 117 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ALOXE3Q9BYJ1 711 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 DUSP21Q9H596 190 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 PLGRKTQ9HBL7 147 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SLAMF7Q9NQ25 335 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 DKK4Q9UBT3 224 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 LYVE1Q9Y5Y7 322 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 LOC400499M0QZD8 3231 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 A0A1W2PRB8 838 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TCRBV16S1A1N1A0A5B0 115 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ERAL1O75616 437 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms