RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TMEM81	Q6P7N7	255 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	HACD2	Q6Y1H2	254 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	GALNTL5	Q7Z4T8	443 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	ARPIN	Q7Z6K5	226 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	GALNT10	Q86SR1	603 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	OR8J3	Q8NGG0	315 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	NODAL	Q96S42	347 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	SDF2	Q99470	211 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	THUMPD3	Q9BV44	507 aa	Known RBP	12.08	□□□□□ -0.48
SF1-206	ENST00000413725	OSBPL11	Q9BXB4	747 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	HES7	Q9BYE0	225 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	POLE3	Q9NRF9	147 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	ARL8B	Q9NVJ2	186 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	KLRF1	Q9NZS2	232 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	CALML5	Q9NZT1	146 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	ANAPC2	Q9UJX6	822 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	CNOT11	Q9UKZ1	510 aa	Known RBP	12.08	□□□□□ -0.48
SF1-206	ENST00000413725	ABCG2	Q9UNQ0	655 aa		12.08	□□□□□ -0.48
SF1-206	ENST00000413725	ANKRD33B	A6NCL7	494 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	EIF4E1B	A6NMX2	242 aa	Known RBP	12.07	□□□□□ -0.48
SF1-206	ENST00000413725	FXYD1	O00168	92 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	SLC28A2	O43868	658 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	PEX1	O43933	1283 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	SNX4	O95219	450 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	RASAL1	O95294	804 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	UTS2	O95399	124 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	IGKV1D-16	P01601	117 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	BMP2	P12643	396 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	HPGD	P15428	266 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	CNR1	P21554	472 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	EVI2B	P34910	448 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	MNAT1	P51948	309 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	MTPN	P58546	118 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	KCNJ2	P63252	427 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	SNTA1	Q13424	505 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	FLYWCH1	Q4VC44	716 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	PRAMEF20	Q5VT98	475 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	NANOGP8	Q6NSW7	305 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	SLC30A6	Q6NXT4	461 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	TRPM8	Q7Z2W7	1104 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	ZNF527	Q8NB42	609 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	TRNT1	Q96Q11	434 aa	Known RBP	12.07	□□□□□ -0.48
SF1-206	ENST00000413725	FAM173A	Q9BQD7	235 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	SLC39A3	Q9BRY0	314 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	DOHH	Q9BU89	302 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	HOXD1	Q9GZZ0	328 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	IKZF5	Q9H5V7	419 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	NANOG	Q9H9S0	305 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	UBQLN4	Q9NRR5	601 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	LUZP4	Q9P127	313 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	BOK	Q9UMX3	212 aa	Predicted RBP	12.07	□□□□□ -0.48
SF1-206	ENST00000413725	AP3M1	Q9Y2T2	418 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	WDR45	Q9Y484	360 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	PCDHGA10	Q9Y5H3	936 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725	CHD6	Q8TD26	2715 aa		12.07	□□□□□ -0.48
SF1-206	ENST00000413725		G3V3Y1	287 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	SCD	O00767	359 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	NGFR	P08138	427 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	GUSB	P08236	651 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	ESRRA	P11474	423 aa	Predicted RBP	12.06	□□□□□ -0.48
SF1-206	ENST00000413725	TBXA2R	P21731	343 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	CASP3	P42574	277 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	CPA2	P48052	419 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	MASP1	P48740	699 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	MEOX1	P50221	254 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	CRISP3	P54108	245 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	GPR85	P60893	370 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	MXRA7	P84157	204 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	FUT5	Q11128	374 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	GPR68	Q15743	365 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	CYP51A1	Q16850	503 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	GRAMD1B	Q3KR37	738 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	DESI1	Q6ICB0	168 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	LRRC74B	Q6ZQY2	392 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	PACS2	Q86VP3	889 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	SULF2	Q8IWU5	870 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	ZNF619	Q8N2I2	560 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725		Q8NA96	180 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	POGLUT1	Q8NBL1	392 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	OR2M7	Q8NG81	312 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	NSL1	Q96IY1	281 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	ZNF597	Q96LX8	424 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	HOPX	Q9BPY8	73 aa	Predicted RBP	12.06	□□□□□ -0.48
SF1-206	ENST00000413725	ECSIT	Q9BQ95	431 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	SPATA9	Q9BWV2	254 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	ANGPTL4	Q9BY76	406 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	TBL1XR1	Q9BZK7	514 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	ZNF350	Q9GZX5	532 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	HHATL	Q9HCP6	504 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	A4GALT	Q9NPC4	353 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	FBXO34	Q9NWN3	711 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	NDE1	Q9NXR1	346 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	NBAS	A2RRP1	2371 aa		12.06	□□□□□ -0.48
SF1-206	ENST00000413725	C5orf58	C9J3I9	102 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SCO2	O43819	266 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	KIAA0513	O60268	411 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	FADS1	O60427	444 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	TNFRSF21	O75509	655 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SORBS2	O94875	1100 aa	Known RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	H6PD	O95479	791 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms