RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CXorf36Q9H7Y0 433 aa9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 SDHAF3Q9NRP4 125 aa9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 SIRT3Q9NTG7 399 aaPredicted RBP9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 ACSS1Q9NUB1 689 aaPredicted RBP9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZCCHC3Q9NUD5 404 aaKnown RBP9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 GIN1Q9NXP7 522 aa9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 MRTO4Q9UKD2 239 aaKnown RBP9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 ITGB1BP2Q9UKP3 347 aa9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 RAP2CQ9Y3L5 183 aa9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 PCDHGB3Q9Y5G1 929 aa9.24□□□□□ -0.93
NCKIPSD-202ENST00000413374 EML6Q6ZMW3 1958 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 H0YC42 278 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 KCNK2O95069 426 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 NKX2-2O95096 273 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZWINTO95229 277 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 ANGPTL1O95841 491 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 HMGN2P05204 90 aaKnown RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 TUBBP07437 444 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 ALOX5P09917 674 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 DHRS4L1P0CG22 281 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 KITP10721 976 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 MSX1P28360 303 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 UQCRC1P31930 480 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 CCT3P49368 545 aaKnown RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 DGKQP52824 942 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 PSMD4P55036 377 aaKnown RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 DIO3P55073 304 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 TPD52P55327 224 aaPredicted RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 GFRA1P56159 465 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 DLX5P56178 289 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 DSCR4P56555 118 aaPredicted RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 NME5P56597 212 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 PSPHP78330 225 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 EMX2Q04743 252 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 RCAN2Q14206 197 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 LASP1Q14847 261 aaKnown RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 VPS26BQ4G0F5 336 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 RAET1LQ5VY80 246 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 NSUN5P2Q63ZY6 315 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 OR4F3Q6IEY1 312 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 MFSD12Q6NUT3 480 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 AAGABQ6PD74 315 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 ENPP6Q6UWR7 440 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 LURAP1LQ8IV03 231 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 LACC1Q8IV20 430 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 CDRT4Q8N9R6 151 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 C9orf106Q8NAJ2 232 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 RNF138Q8WVD3 245 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 OR5P2Q8WZ92 322 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 CDS1Q92903 461 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 COQ8BQ96D53 544 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 PGM2Q96G03 612 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 PRPF18Q99633 342 aaKnown RBP9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZNF337Q9Y3M9 751 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 KCNE3Q9Y6H6 103 aa9.23□□□□□ -0.93
NCKIPSD-202ENST00000413374 NPIPA5A0A0B4J1W7 369 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 TMEM120BA0PK00 339 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CLCA1A8K7I4 914 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 FAM47E-STBD1D6RA91 191 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 NPIPA7E9PJI5 369 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CPSF4O95639 269 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 OPN1LWP04000 364 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 NPIPA8P0DM63 369 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CPN1P15169 458 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 DDX5P17844 614 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 PRPS1L1P21108 318 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CEACAM8P31997 349 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 SOAT1P35610 550 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 TIMP3P35625 211 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 RPL3P39023 403 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 MAP3K8P41279 467 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 PRIM2P49643 509 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 LHX2P50458 406 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZNF136P52737 540 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CASP9P55211 416 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CLDN8P56748 225 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 WDR4P57081 412 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 B3GALT5-AS1P59052 145 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 MAGOHP61326 146 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 PRR5P85299 388 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 C17orf67Q0P5P2 114 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 BST1Q10588 318 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 FOXF2Q12947 444 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 MYBPHQ13203 477 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 TP53BP2Q13625 1128 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 SF3B4Q15427 424 aaKnown RBP eCLIP9.22□□□□□ -0.934e-19■■■■■ 52.2
NCKIPSD-202ENST00000413374 LSM12Q3MHD2 195 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 BEND6Q5SZJ8 279 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ARSKQ6UWY0 536 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CROCCP2Q86T23 111 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 HOMEZQ8IX15 550 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 RIMKLAQ8IXN7 391 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 DMRTC2Q8IXT2 367 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 CLECL1Q8IZS7 167 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 GCNT2Q8N0V5 402 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 COX18Q8N8Q8 333 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 FADS6Q8N9I5 356 aa9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 RELL2Q8NC24 303 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-202ENST00000413374 ZPLD1Q8TCW7 415 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms