RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GTF2H4Q92759 462 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 HAVCR1Q96D42 359 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TMEM19Q96HH6 336 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF696Q9H7X3 374 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 GPN2Q9H9Y4 310 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 DAPP1Q9UN19 280 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NPIPA1Q9UND3 350 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 HSPE1-MOB4S4R3N1 261 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 HCRTR2O43614 444 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 HMGN1P05114 100 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 NR2C1P13056 603 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 BMP1P13497 986 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 PRG2P13727 222 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 NUBP1P53384 320 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 MZT2AQ6P582 158 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 ANKRD12Q6UB98 2062 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 ERI1Q8IV48 349 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 LGI4Q8N135 537 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 OR5M3Q8NGP4 307 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF420Q8TAQ5 688 aaPredicted RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 WDR20Q8TBZ3 569 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 AP3S1Q92572 193 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 UTP4Q969X6 686 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 INPP5KQ9BT40 448 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF700Q9H0M5 742 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 PPP4R1LQ9P1A2 415 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 MED16Q9Y2X0 877 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 CCDC187A0A096LP49 1063 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 OR2A25A4D2G3 310 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 B3GALNT1O75752 331 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 RCBTB2O95199 551 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 CD1CP29017 333 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 GFERP55789 205 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TARDBPQ13148 414 aaKnown RBP eCLIP8□□□□□ -1.13
SYNE1-211ENST00000413186 NPTX1Q15818 432 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 RGS21Q2M5E4 152 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 SSX6Q7RTT6 188 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 CARM1Q86X55 608 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF615Q8N8J6 731 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 OR10H5Q8NGA6 315 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TM9SF4Q92544 642 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 IP6K3Q96PC2 410 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 OR4K3Q96R72 315 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 OR1F2PQ96R84 312 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TUBA1CQ9BQE3 449 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 DKKL1Q9UK85 242 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 C4orf47A7E2U8 309 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 A8MVJ9 347 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 DSCR3O14972 297 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 HSPA12AO43301 675 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TNFSF14O43557 240 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 GALR3O60755 368 aaPredicted RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 IFNA10P01566 189 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 IFNA4P05014 189 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 HOXA6P31267 233 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 PCGF2P35227 344 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 CCL7P80098 99 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 CWF19L1Q69YN2 538 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 OPN5Q6U736 354 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 PELI3Q8N2H9 469 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 COMMD1Q8N668 190 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 NT5CQ8TCD5 201 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 DPH2Q9BQC3 489 aaPredicted RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 NUDT16L1Q9BRJ7 211 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 MOB1AQ9H8S9 216 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 CTPS2Q9NRF8 586 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 HPF1Q9NWY4 346 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TEX10Q9NXF1 929 aaPredicted RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 PRPH2P23942 346 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 NR0B1P51843 470 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 RPS26P62854 115 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 NNATQ16517 81 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 SNAPC1Q16533 368 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 C3orf38Q5JPI3 329 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 TOR1AIP2Q8NFQ8 470 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 THAP3Q8WTV1 239 aaPredicted RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 WDR34Q96EX3 536 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 HS6ST2Q96MM7 605 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 OR2A14Q96R47 310 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 PSD2Q9BQI7 771 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 VAPAQ9P0L0 249 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 ASB1Q9Y576 335 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 RBM7Q9Y580 266 aaKnown RBP8□□□□□ -1.13
SYNE1-211ENST00000413186 MYO10Q9HD67 2058 aa8□□□□□ -1.13
SYNE1-211ENST00000413186 A0A075B6Q4 140 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 NME4O00746 187 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 PPM1DO15297 605 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SOD1P00441 154 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF12P17014 697 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GGT1P19440 569 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 MAKP20794 623 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 IL12AP29459 219 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 NOVA1P51513 510 aaKnown RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 DEFA5Q01523 94 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 TAF13Q15543 124 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SSX2Q16385 188 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SGCBQ16585 318 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF613Q6PF04 617 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 FIGNL1Q6PIW4 674 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms