RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ZNF605Q86T29 641 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CARM1Q86X55 608 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 VRK2Q86Y07 508 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 LACC1Q8IV20 430 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PEX5LQ8IYB4 626 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ESX1Q8N693 406 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 BCORP1Q8N888 145 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 APCDD1LQ8NCL9 501 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 C17orf47Q8NEP4 570 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 OR4D11Q8NGI4 311 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 OR2T29Q8NH02 315 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 OR52P1PQ8NH57 321 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PMM1Q92871 262 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 TMBIM1Q969X1 311 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ADIPOR1Q96A54 375 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ZG16BQ96DA0 208 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 VMP1Q96GC9 406 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 LCORQ96JN0 433 aaPredicted RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 ZNF300Q96RE9 604 aaPredicted RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 LMF1Q96S06 567 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ZNF184Q99676 751 aaPredicted RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 LPAR4Q99677 370 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ARHGDIGQ99819 225 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 G6PC3Q9BUM1 346 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 C9orf16Q9BUW7 83 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 AMBRA1Q9C0C7 1298 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 VCXQ9H320 206 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 MTHFD2LQ9H903 347 aaPredicted RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 POLR1BQ9H9Y6 1135 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CACYBPQ9HB71 228 aaKnown RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 VNN3Q9NY84 501 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 KCNE5Q9UJ90 142 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CNOT11Q9UKZ1 510 aaKnown RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 PADI1Q9ULC6 663 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 IFT52Q9Y366 437 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 OR10H1Q9Y4A9 318 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PCDHGA10Q9Y5H3 936 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 HS3ST3B1Q9Y662 390 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ENPP4Q9Y6X5 453 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 SDK2Q58EX2 2172 aa6.15□□□□□ -1.43
VPS41-204ENST00000413141 ZFHX2Q9C0A1 2572 aaPredicted RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 IGHV1-45A0A0A0MS14 117 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 TRBV11-1A0A0K0K1C0 115 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 CDHR4A6H8M9 788 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 CLDN24A6NM45 220 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 C21orf140B9A014 251 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 NPIPB9F8W1W9 429 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 STMND1H3BQB6 276 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 J3KTA2 159 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PDLIM1O00151 329 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 DLL1O00548 723 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SOCS2O14508 198 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SOCS6O14544 535 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 GNGT2O14610 69 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 EI24O14681 340 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 TERTO14746 1132 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 TO15178 435 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 ADAMDEC1O15204 470 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 ACOX3O15254 700 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PRKNO60260 465 aaPredicted RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 RAD1O60671 282 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SEMA7AO75326 666 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 E2F6O75461 281 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 RASAL1O95294 804 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SLC34A2O95436 690 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 IL33O95760 270 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 LGI1O95970 557 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 IGHEP01854 428 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 COX6A1P12074 109 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 NID1P14543 1247 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 IL7RP16871 459 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 ZNF26P17031 533 aaPredicted RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 TCN2P20062 427 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 MMP11P24347 488 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 RRM2P31350 389 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 DCTP40126 519 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PSMD4P55036 377 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 RPS18P62269 152 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 RNF4P78317 190 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PSPHP78330 225 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SPIBQ01892 262 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PLAURQ03405 335 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 LARS2Q15031 903 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 NPTX1Q15818 432 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 DECR1Q16698 335 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 EIPR1Q53HC9 387 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PDZK1Q5T2W1 519 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 MRPL2Q5T653 305 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 HLA-DQA1Q5Y7H0 255 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SHQ1Q6PI26 577 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 HSDL2Q6YN16 418 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 DEF8Q6ZN54 512 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PPP1R32Q7Z5V6 425 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 TMEM179BQ7Z7N9 219 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 MARCH9Q86YJ5 346 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 RBM45Q8IUH3 476 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 ZDHHC13Q8IUH4 622 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 NLGN4XQ8N0W4 816 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SLC34A3Q8N130 599 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms