RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ABHD11Q8NFV4 315 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PHF10Q8WUB8 498 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 RASSF5Q8WWW0 418 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TM9SF4Q92544 642 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF566Q969W8 418 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 RERGQ96A58 199 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PNPLA2Q96AD5 504 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TBC1D20Q96BZ9 403 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 MVB12AQ96EY5 273 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 MMABQ96EY8 250 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 LINGO1Q96FE5 620 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HIST1H2AHQ96KK5 128 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 C10orf90Q96M02 699 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PRAP1Q96NZ9 151 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 OR2A5Q96R48 311 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SNX18Q96RF0 628 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HIST1H2AJQ99878 128 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 MRPL57Q9BQC6 102 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 H2AFJQ9BTM1 129 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TRIM54Q9BYV2 358 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PCBD2Q9H0N5 130 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SLC6A15Q9H2J7 730 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 RHOJQ9H4E5 214 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SYNPO2LQ9H987 977 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 LIN28AQ9H9Z2 209 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SLC52A3Q9NQ40 469 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 CCDC177Q9NQR7 707 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TMEM184CQ9NVA4 438 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PAK1IP1Q9NWT1 392 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 NPAP1Q9NZP6 1156 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TXNDC16Q9P2K2 825 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SLC17A6Q9P2U8 582 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TRPC4Q9UBN4 977 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF282Q9UDV7 671 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TRPS1Q9UHF7 1281 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ZDHHC2Q9UIJ5 367 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 FBXL4Q9UKA2 621 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 VPS4AQ9UN37 437 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PDE10AQ9Y233 779 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TRAF6Q9Y4K3 522 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PSAT1Q9Y617 370 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 FLNBO75369 2602 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ICE1Q9Y2F5 2266 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 DIDO1Q9BTC0 2240 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 A0A0A6YYC8 382 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 DHRS12A0PJE2 317 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CLEC18AA5D8T8 446 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 PABPN1LA6NDY0 278 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SAGE2PA6NJ88 616 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 I3L1I5 382 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 P2RX6O15547 441 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SCO2O43819 266 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 HPP00738 406 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 STATHP02808 62 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 JUNP05412 331 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 HEXBP07686 556 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ANXA5P08758 320 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF37AP17032 561 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 GNLYP22749 145 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CRHBPP24387 322 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ATP5F1P24539 256 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 HRH2P25021 359 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CXCR2P25025 360 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 RYKP34925 604 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 AVPR1BP47901 424 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 UQCRFS1P47985 274 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 PPP5CP53041 499 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 PGGT1BP53609 377 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 EMP2P54851 167 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 PKNOX1P55347 436 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 EEFSECP57772 596 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 IL2P60568 153 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 RPS15AP62244 130 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CSNK1G2P78368 415 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 MAT1AQ00266 395 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CD83Q01151 205 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 EEF1A2Q05639 463 aaKnown RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 PTPN13Q12923 2485 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SELENBP1Q13228 472 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 IL18R1Q13478 541 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 FAM53BQ14153 422 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 NRF1Q16656 503 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 NDUFA9Q16795 377 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 SYT16Q17RD7 645 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 PRR30Q53SZ7 412 aaPredicted RBP4.93□□□□□ -1.62
LINC00342-201ENST00000412393 MTX3Q5HYI7 312 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CCNJQ5T5M9 372 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 HECTD2Q5U5R9 776 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 GPR107Q5VW38 600 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 TTC23Q5W5X9 447 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 LCTLQ6UWM7 567 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 IGFL3Q6UXB1 125 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CLEC18BQ6UXF7 455 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 MBOAT1Q6ZNC8 495 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 KCTD8Q6ZWB6 473 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 VN1R4Q7Z5H5 301 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 C17orf64Q86WR6 236 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 RIMKLAQ8IXN7 391 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 ADGRG5Q8IZF4 528 aa4.93□□□□□ -1.62
LINC00342-201ENST00000412393 CBR4Q8N4T8 237 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms