RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SLCO2A1Q92959 643 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 LHX4Q969G2 390 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PNPLA2Q96AD5 504 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SGK3Q96BR1 496 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 TM4SF19Q96DZ7 209 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SLC38A2Q96QD8 506 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 TTYH2Q9BSA4 534 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 RPP25Q9BUL9 199 aaKnown RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 APOOQ9BUR5 198 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 ST6GALNAC5Q9BVH7 336 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 LRRN3Q9H3W5 708 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 UBE2TQ9NPD8 197 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PTTG3PQ9NZH4 202 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PITPNC1Q9UKF7 332 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 ELF5Q9UKW6 265 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 CSDC2Q9Y534 153 aaKnown RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PPIAL4AQ9Y536 164 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PNPLA6Q8IY17 1366 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ATP10AO60312 1499 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 GREB1LQ9C091 1923 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 IGLV9-49A0A0B4J1Y8 123 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 A0A0J9YVX5 310 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 GABRR3A8MPY1 467 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PRAC2D3DTV9 90 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ANHXE9PGG2 379 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 LMO7DNF2Z398 122 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF701M0R085 212 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 OR7A17O14581 309 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 N4BP1O75113 896 aaKnown RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 LRCH4O75427 683 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 CDK2AP2O75956 126 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 FGF19O95750 216 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TGM6O95932 706 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 INSRP06213 1382 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ALOX5P09917 674 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PTNP21246 168 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TBXA2RP21731 343 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 MSR1P21757 451 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 SLC1A4P43007 532 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 NAMPTP43490 491 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 BRCC3P46736 316 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 RAB9AP51151 201 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ATP1B3P54709 279 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 RPL27P61353 136 aaKnown RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ASPHQ12797 758 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TRDNQ13061 729 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PEX6Q13608 980 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 MAP3K19Q56UN5 1328 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 SFT2D3Q587I9 215 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 XKR6Q5GH73 641 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF324BQ6AW86 544 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 FAM71F2Q6NXP2 309 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PNCKQ6P2M8 343 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 BHLHB9Q6PI77 547 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TMEM184AQ6ZMB5 413 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF730Q6ZMV8 503 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 LANCL3Q6ZV70 420 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TMEM17Q86X19 198 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TBC1D10CQ8IV04 446 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 METTL27Q8N6F8 245 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 TRIML2Q8N7C3 387 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 Q8N9G6 341 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF383Q8NA42 475 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 MFSD9Q8NBP5 474 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 POC1AQ8NBT0 407 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 OR4C5Q8NGB2 326 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 OR13F1Q8NGS4 319 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 GLYATL2Q8WU03 294 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ELMO1Q92556 727 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 LPAR4Q99677 370 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PSD2Q9BQI7 771 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 C20orf24Q9BUV8 137 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 PARD6BQ9BYG5 372 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ANKRD60Q9BZ19 345 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 MTHFD2LQ9H903 347 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-204ENST00000412061 SLC7A8Q9UHI5 535 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 VANGL2Q9ULK5 521 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 ABCG2Q9UNQ0 655 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 GMEB1Q9Y692 573 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 MAD1L1Q9Y6D9 718 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 RNF215Q9Y6U7 377 aa3.93□□□□□ -1.78
BRCA1-204ENST00000412061 NEDD4P46934 1319 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 OR6C74A6NCV1 312 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 TCP10L2B9ZVM9 353 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 K7ERQ8 282 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 WWP2O00308 870 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 TRDMT1O14717 391 aaKnown RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ACOT8O14734 319 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ATP6V0E1O15342 81 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SRPX2O60687 465 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 H6PDO95479 791 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 GNA14O95837 355 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ECDO95905 644 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 IGHV4-39P01824 125 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 MBP02144 154 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 FAM157CP0CG43 387 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 STAG3L2P0CL84 134 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms