RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CSGALNACT1Q8TDX6 532 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRIB2Q92519 343 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 FATE1Q969F0 183 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 WDR34Q96EX3 536 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC34Q96HJ3 373 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC35G5Q96KT7 338 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAGEB10Q96LZ2 347 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 C19orf24Q9BVV8 132 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CACNG6Q9BXT2 260 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TEX13AQ9BXU3 409 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRIM4Q9C037 500 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 THAP9Q9H5L6 903 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 LINC00472Q9H8W2 130 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 RNF121Q9H920 327 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 EPB41L5Q9HCM4 733 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 LTB4R2Q9NPC1 389 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 C8orf17Q9NRJ1 99 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP8A2Q9NTI2 1148 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GINM1Q9NU53 330 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM51Q9NW97 253 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 MRPL16Q9NX20 251 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 VAPAQ9P0L0 249 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNRD1Q9P1U0 126 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 NUFIP1Q9UHK0 495 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 BAIAP2L1Q9UHR4 511 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CNOT7Q9UIV1 285 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 KCNG1Q9UIX4 513 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPR34Q9UPC5 381 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SHOC2Q9UQ13 582 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP8A1Q9Y2Q0 1164 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPR52Q9Y2T5 361 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 LINC00588Q9Y4M8 146 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CSDC2Q9Y534 153 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAP3K19Q56UN5 1328 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GRIN2BQ13224 1484 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SIPA1L3O60292 1781 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 AK9Q5TCS8 1911 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 NINQ8N4C6 2090 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SIP14410 1827 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARHGEF40Q8TER5 1519 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PNPLA6Q8IY17 1366 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PPIP5K1Q6PFW1 1433 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGLV11-55A0A075B6I3 123 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGHV3-66A0A0C4DH42 116 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 IQCA1LA6NCM1 817 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARGFXA6NJG6 315 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF716A6NP11 495 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 A8MVJ9 347 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDRT15L2A8MXV6 281 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 C19orf81C9J6K1 198 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 F8VP50 259 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 K7EQD1 137 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SULT2B1O00204 365 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC28A1O00337 649 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLDN5O00501 218 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SOCS6O14544 535 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRDMT1O14717 391 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRRTM2O43300 516 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 BUB1O43683 1085 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 AVILO75366 819 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDK14O94921 469 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 HEXIM1O94992 359 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 NKX2-2O95096 273 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 NXPH4O95158 308 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 FKBP9O95302 570 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGLV1-51P01701 117 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 CRPP02741 224 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPIP06744 558 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 C8orf88P0DMB2 117 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMIGD3P0DMS9 266 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SPNP16150 400 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 AKR1C4P17516 323 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PSMB8P28062 276 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 AHRP35869 848 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC1A4P43007 532 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PHKA1P46020 1223 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPL21P46778 160 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARCN1P48444 511 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRAPPC10P48553 1259 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 NDST2P52849 883 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 COPAP53621 1224 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR4D2P58180 307 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 EVA1CP58658 441 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SUMO1P63165 101 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 IFITM3Q01628 133 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 DHODHQ02127 395 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACSM1Q08AH1 577 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM267Q0VDI3 215 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 MGAT2Q10469 447 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 IL18R1Q13478 541 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 SERINC3Q13530 473 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ELAVL3Q14576 367 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF345Q14585 488 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 MEF2DQ14814 521 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPS6KA2Q15349 733 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PKN2Q16513 984 aaKnown RBP-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 MEP1AQ16819 746 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 RILPL1Q5EBL4 403 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM240Q5SV17 173 aa-1.96□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLEKHS1Q5SXH7 462 aa-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms