RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 BTBD10Q9BSF8 475 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ABHD6Q9BV23 337 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ROPN1BQ9BZX4 212 aaPredicted RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 MFSD1Q9H3U5 465 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 VPS37BQ9H9H4 285 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 TBC1D17Q9HA65 648 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ROPN1Q9HAT0 212 aaPredicted RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 TMBIM4Q9HC24 238 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 VPS18Q9P253 973 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 NFKBIL1Q9UBC1 381 aaPredicted RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 MUTYHQ9UIF7 546 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 FANCMQ8IYD8 2048 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 TNRC6BQ9UPQ9 1833 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 KMT2EQ8IZD2 1858 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 VCANP13611 3396 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 TTC28Q96AY4 2481 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 PI4KAP42356 2102 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 IGKV3D-15A0A087WSY6 115 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 TRBV5-4A0A0C4DH59 114 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 C1orf232A0A0U1RR37 186 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 EXOC1LA0A1B0GW35 172 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 TCRBV21S2A2A0A5A6 115 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 CCDC162PA2VCL2 907 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 RGSL1A5PLK6 1076 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 OR51F1A6NGY5 319 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 C2orf81A6NN90 581 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 KPNA3O00505 521 aaPredicted RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 CCL22O00626 93 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 RASGRF2O14827 1237 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SYNCRIPO60506 623 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 UGT1A9O60656 530 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 PIAS1O75925 651 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 VAPBO95292 243 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 GOT2P00505 430 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 IL1BP01584 269 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 IGLV3-19P01714 112 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 PATE4P0C8F1 98 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 ZNF883P0CG24 379 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 PRSS56P0CW18 603 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 GABRG2P18507 467 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 GNAZP19086 355 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 OGNP20774 298 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 SLC6A6P31641 620 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 CA5AP35218 305 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 P2RY2P41231 377 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 MAGEA12P43365 314 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 RPS9P46781 194 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 LEPRP48357 1165 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 PSMD8P48556 350 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SPINT3P49223 89 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 CSE1LP55060 971 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 RPS18P62269 152 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 SEMG2Q02383 582 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SIGLEC14Q08ET2 396 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 ELP6Q0PNE2 266 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 CNTN1Q12860 1018 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 TYSND1Q2T9J0 566 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 POM121L1PQ3SYA9 428 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 KBTBD12Q3ZCT8 623 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 HSP90AA5PQ58FG0 334 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 ZNF789Q5FWF6 425 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 HENMT1Q5T8I9 393 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 CFAP161Q6P656 301 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 AFTPHQ6ULP2 937 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 RFLNAQ6ZTI6 216 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SH2D5Q6ZV89 423 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 HSD11B1LQ7Z5J1 315 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 KCNMB4Q86W47 210 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SLC26A11Q86WA9 606 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 LMNTD2Q8IXW0 634 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 RIBC1Q8N443 379 aaPredicted RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 GPR26Q8NDV2 337 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 OR4K2Q8NGD2 314 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 WDR20Q8TBZ3 569 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 CDKL2Q92772 493 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 TLCD1Q96CP7 247 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 PKNOX2Q96KN3 472 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 PAFAH2Q99487 392 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 RBBP8Q99708 897 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 LITAFQ99732 161 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 CPNE1Q99829 537 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SUDS3Q9H7L9 328 aaPredicted RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 LMAN1LQ9HAT1 526 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 UGT1A7Q9HAW7 530 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 UGT1A10Q9HAW8 530 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 UGT1A8Q9HAW9 530 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 ACKR4Q9NPB9 350 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 IL26Q9NPH9 171 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 IARS2Q9NSE4 1012 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 C20orf96Q9NUD7 363 aaPredicted RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 ZNF701Q9NV72 531 aaPredicted RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 SMOXQ9NWM0 555 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 LGALS13Q9UHV8 139 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SLC24A2Q9UI40 661 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SCML1Q9UN30 329 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 NDRG2Q9UN36 371 aaKnown RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 ITM2BQ9Y287 266 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 GRIP1Q9Y3R0 1128 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 FADS3Q9Y5Q0 445 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 SNX8Q9Y5X2 465 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms