RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GMFGO60234 142 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ZNF16P17020 682 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 IGFBP5P24593 272 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 EDNRAP25101 427 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 AGTR1P30556 359 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 EIF1AXP47813 144 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 C21orf58P58505 322 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PHEXP78562 749 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 VLDLRP98155 873 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PSG6Q00889 435 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 BSPH1Q075Z2 132 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SGO1Q5FBB7 561 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 FRG2Q64ET8 278 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 C11orf71Q6IPW1 123 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 FIGNL1Q6PIW4 674 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 NUFIP2Q7Z417 695 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GALNT10Q86SR1 603 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 KLHL7Q8IXQ5 586 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 OR10D3Q8NH80 312 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 UHMK1Q8TAS1 419 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ROBO4Q8WZ75 1007 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 FRG2BQ96QU4 278 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RNF14Q9UBS8 474 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SNX12Q9UMY4 172 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ANGPTL3Q9Y5C1 460 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 AP4B1Q9Y6B7 739 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 HEATR1Q9H583 2144 aaKnown RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 A0A0J9YW62 118 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GOLGA6L10A0A0M3HER8 536 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 A0A1W2PP18 115 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GOLGA6L10A6NI86 522 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ELOA3DA6NLF2 546 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 CLDN9O95484 217 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 CD3EP07766 207 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PSMA4P25789 261 aaKnown RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SHC1P29353 583 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 IL12BP29460 328 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 THBS2P35442 1172 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 DEKP35659 375 aaKnown RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ALDH9A1P49189 494 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ALDH18A1P54886 795 aaKnown RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RUNX1T1Q06455 604 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 LOXL1Q08397 574 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ELOA3BQ3SY89 546 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PPP4R4Q6NUP7 873 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 TFAP2EQ6VUC0 442 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RAPH1Q70E73 1250 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ELOA3Q8NG57 546 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RHEBL1Q8TAI7 183 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PIWIL2Q8TC59 973 aaKnown RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 TRPC4APQ8TEL6 797 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 C1orf159Q96HA4 380 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ESRP2Q9H6T0 727 aaKnown RBP10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 FBXO34Q9NWN3 711 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ZNF225Q9UK10 706 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SNX24Q9Y343 169 aa10.57□□□□□ -0.72
SPTLC1P3-201ENST00000403408 IGLV3-32A0A0A0MS00 114 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ZNF814B7Z6K7 855 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ADAMDEC1O15204 470 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PDYNP01213 254 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 IGKV1D-16P01601 117 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ALDOAP04075 364 aaKnown RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 COL6A2P12110 1019 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GFAPP14136 432 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 CHN1P15882 459 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ADH6P28332 368 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 CASP9P55211 416 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 CTBP2P56545 445 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RPS3AP61247 264 aaKnown RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RAE1P78406 368 aaKnown RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 DR1Q01658 176 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GANABQ14697 944 aaKnown RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SGCBQ16585 318 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 TCHHL1Q5QJ38 904 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SFRP5Q5T4F7 317 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 LRRC8AQ8IWT6 810 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PLD6Q8N2A8 252 aaKnown RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 ZNF525Q8N782 197 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 POC1BQ8TC44 478 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GFM2Q969S9 779 aaKnown RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 HS6ST2Q96MM7 605 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 RHNO1Q9BSD3 238 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 GRIP2Q9C0E4 1043 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 STMN4Q9H169 189 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 MANSC1Q9H8J5 431 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 NPAP1Q9NZP6 1156 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PCTPQ9UKL6 214 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 UTS2RQ9UKP6 389 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SLC12A4Q9UP95 1085 aa10.56□□□□□ -0.72
SPTLC1P3-201ENST00000403408 LINC01387J3KSC0 135 aa10.55□□□□□ -0.72
SPTLC1P3-201ENST00000403408 TNFSF11O14788 317 aa10.55□□□□□ -0.72
SPTLC1P3-201ENST00000403408 EFNA2O43921 213 aa10.55□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PLOD3O60568 738 aa10.55□□□□□ -0.72
SPTLC1P3-201ENST00000403408 PLGP00747 810 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1P3-201ENST00000403408 C2P06681 752 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms