RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 A6NHS1 94 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 STATHP02808 62 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 RAB40ALP0C0E4 278 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 NR0B2Q15466 257 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 GPR139Q6DWJ6 353 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 HTR3DQ70Z44 454 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 LARP4Q71RC2 724 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 SGPP2Q8IWX5 399 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 GALNT11Q8NCW6 608 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 OR10Q1Q8NGQ4 319 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 SPRYD4Q8WW59 207 aaPredicted RBP7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 RAB40AQ8WXH6 277 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 TFAP2CQ92754 450 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 SORT1Q99523 831 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 CACNG6Q9BXT2 260 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 IL37Q9NZH6 218 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 PKD1L3Q7Z443 1732 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 D6RAR5 112 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 OR2T1O43869 369 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 CSF2P04141 144 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 TYRP1P17643 537 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 HOXA9P31269 272 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 LSSP48449 732 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 HSD17B7P56937 341 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 WDR5P61964 334 aaKnown RBP7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 ID2Q02363 134 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 TMEM244Q5VVB8 128 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 RAET1LQ5VY80 246 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 CBLL1Q75N03 491 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 NLRP8Q86W28 1048 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 NRMQ8IXM6 262 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 S100PBPQ96BU1 408 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 MALSU1Q96EH3 234 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 APIPQ96GX9 242 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 DPH2Q9BQC3 489 aaPredicted RBP7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 TCEAL7Q9BRU2 100 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 KLF16Q9BXK1 252 aaPredicted RBP7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 SLC17A9Q9BYT1 436 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF442Q9H7R0 627 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 ARNT2Q9HBZ2 717 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 APMAPQ9HDC9 416 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 PAQR5Q9NXK6 330 aaPredicted RBP7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 ANKRD36CQ5JPF3 1778 aa7.91□□□□□ -1.14
SPTLC3-201ENST00000399002 TGM5O43548 720 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 ADAMTS4O75173 837 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PTHP01270 115 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 AMY2AP04746 511 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 HNRNPA2B1P22626 353 aaKnown RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 DCTP40126 519 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 MAN2A2P49641 1150 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 USF2Q15853 346 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 DUSP7Q16829 419 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 HMBOX1Q6NT76 420 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 DUS1LQ6P1R4 473 aaKnown RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 LRRC28Q86X40 367 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SLC15A4Q8N697 577 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PPP1R35Q8TAP8 253 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 ELP4Q96EB1 424 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 MSANTD3Q96H12 275 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PITX2Q99697 317 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SLC25A31Q9H0C2 315 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 OR10A5Q9H207 317 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 OR10A2Q9H208 303 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 ACSS1Q9NUB1 689 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SRPK3Q9UPE1 567 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF443Q9Y2A4 671 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PRAMEF26H0Y7S4 382 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PPP1R3DO95685 299 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 ACP2P11117 423 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 LAMP1P11279 417 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 CYBAP13498 195 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 TPT1P13693 172 aaKnown RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 ACPPP15309 386 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PTBP1P26599 531 aaKnown RBP eCLIP7.9□□□□□ -1.141e-6■■■■■ 45.1
SPTLC3-201ENST00000399002 GKP32189 559 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 HTR2BP41595 481 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 STK19P49842 368 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SLC26A5P58743 744 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 RPS15P62841 145 aaKnown RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 RIN1Q13671 783 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 DEFB134Q4QY38 66 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 MISPQ8IVT2 679 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 GTPBP8Q8N3Z3 284 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 NPWQ8N729 165 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 C22orf15Q8WYQ4 148 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SHISA4Q96DD7 197 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SLC30A3Q99726 388 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 DPCDQ9BVM2 203 aaPredicted RBP7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 SACM1LQ9NTJ5 587 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 FBXL3Q9UKT7 428 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 MYH1P12882 1939 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 CLIC3O95833 236 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 MAS1P04201 325 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 AHRP35869 848 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 PER3P56645 1201 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 GPR176Q14439 515 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 HMGN3Q15651 99 aa7.9□□□□□ -1.14
SPTLC3-201ENST00000399002 DCST2Q5T1A1 773 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms