RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 STYXL1Q9Y6J8 313 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 SF3B1O75533 1304 aaKnown RBP eCLIP2.12□□□□□ -2.073e-6■■■■□ 20.7
CD47-203ENST00000398258 PPIAL4CA0A0B4J2A2 164 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ZNF840PA6NDX5 716 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 CPLX1O14810 134 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 BCL2L11O43521 198 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 JAK2O60674 1132 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 TBX19O60806 448 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 TRIM3O75382 744 aaPredicted RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 SPAG6O75602 509 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 GJB5O95377 273 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ASNSP08243 561 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 H2AFZP0C0S5 128 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 PPIAL4GP0DN37 164 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 PDHBP11177 359 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 XRCC1P18887 633 aaPredicted RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 TPSB2P20231 275 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 NT5EP21589 574 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 PAICSP22234 425 aaKnown RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 GATA2P23769 480 aaPredicted RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 BRCC3P46736 316 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ALDH3B2P48448 385 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 RPL34P49207 117 aaKnown RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 HSD17B7P56937 341 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 COX10Q12887 443 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 OVGP1Q12889 678 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 DPYSL3Q14195 570 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 TPSAB1Q15661 275 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 TCTEX1D4Q5JR98 221 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 LGSNQ5TDP6 509 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 RNLSQ5VYX0 342 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 NCR3LG1Q68D85 454 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 PNCKQ6P2M8 343 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ARMCX2Q7L311 632 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ERASQ7Z444 233 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 SLC25A42Q86VD7 318 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 P2RY8Q86VZ1 359 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 LYG1Q8N1E2 194 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 TFB1MQ8WVM0 346 aaKnown RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 RAB3CQ96E17 227 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 C4orf36Q96KX1 117 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 TPPP3Q9BW30 176 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 HCAR1Q9BXC0 346 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 POLR1EQ9GZS1 481 aaKnown RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 RAB33BQ9H082 229 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 MEPEQ9NQ76 525 aaPredicted RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 EXOSC3Q9NQT5 275 aaKnown RBP2.11□□□□□ -2.07
CD47-203ENST00000398258 TMOD2Q9NZR1 351 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 MAB21L2Q9Y586 359 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 GMPPBQ9Y5P6 360 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ZNF318Q5VUA4 2279 aa2.11□□□□□ -2.07
CD47-203ENST00000398258 ATP10DQ9P241 1426 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 A0A087WWV3 80 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 A0A1W2PNV4 684 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 PPIHO43447 177 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 DUX1O43812 170 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 SRPX2O60687 465 aaPredicted RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 ZNF253O75346 499 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 UFL1O94874 794 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 GSTT2P0CG29 244 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 GSTT2BP0CG30 244 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TSPY4P0CV99 314 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TSPY10P0CW01 314 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 LAMP1P11279 417 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 KRT13P13646 458 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TBXA2RP21731 343 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 PSMA2P25787 234 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 CALRP27797 417 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 KIF5BP33176 963 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 RPL4P36578 427 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 SLC8A3P57103 927 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 ZFP36L1Q07352 338 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 ATXN7L3Q14CW9 347 aaPredicted RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 ABRAXAS2Q15018 415 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TGIF1Q15583 401 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 UBE2V2Q15819 145 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 CAMK4Q16566 473 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 ZNF239Q16600 458 aaKnown RBP2.1□□□□□ -2.07
CD47-203ENST00000398258 PPP1R3AQ16821 1122 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 CYP51A1Q16850 503 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 TATDN3Q17R31 274 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 SLC36A3Q495N2 470 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 NADK2Q4G0N4 442 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 HIGD2BQ4VC39 106 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 RABGAP1LQ5R372 815 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 FAM120AOSQ5T036 256 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 PVRIGQ6DKI7 326 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 SULT1C3Q6IMI6 304 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 CES3Q6UWW8 571 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 GCNT7Q6ZNI0 430 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 PRSS48Q7RTY5 328 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 PPP1R42Q7Z4L9 355 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 HSD11B1LQ7Z5J1 315 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 PARGQ86W56 976 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 IFNEQ86WN2 208 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 ERICH1Q86X53 443 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 HIPK1Q86Z02 1210 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 ZDHHC21Q8IVQ6 265 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 SLC22A18ASQ8N1D0 253 aa2.1□□□□□ -2.07
CD47-203ENST00000398258 FAM133AQ8N9E0 248 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms