RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CXorf21Q9HAI6 301 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 IL1RL2Q9HB29 575 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF701Q9NV72 531 aaPredicted RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 MTCH1Q9NZJ7 389 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 UPB1Q9UBR1 384 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 LEF1Q9UJU2 399 aaPredicted RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 LYVE1Q9Y5Y7 322 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ELOA3CA0A087WX78 387 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ELOA3DA6NLF2 546 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 M0R296 226 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ADAM12O43184 909 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SUSD5O60279 629 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SDC3O75056 442 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 BCL10O95999 233 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 MT-CYBP00156 380 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 DAOP14920 347 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 LBPP18428 481 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 KCNK10P57789 538 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 MLF1P58340 268 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 MARC1Q5VT66 337 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TP53I13Q8NBR0 393 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SEMA6DQ8NFY4 1073 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 OR10H5Q8NGA6 315 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RNFT2Q96EX2 444 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SLITRK2Q9H156 845 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 AUNIPQ9H7T9 357 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TXNRD2Q9NNW7 524 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 DYRK4Q9NR20 520 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 FAM86C1Q9NVL1 165 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF282Q9UDV7 671 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TBL2Q9Y4P3 447 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TRAV25A0A0B4J276 109 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 LNP1A1A4G5 178 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 C1SP09871 688 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 HSD17B1P14061 328 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RPA2P15927 270 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SERPINB10P48595 397 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 CDH15P55291 814 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 VLDLRP98155 873 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF846Q147U1 533 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 CYP51A1Q16850 503 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 MORN1Q5T089 497 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TSTD2Q5T7W7 516 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 HECTD2Q5U5R9 776 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ADNP2Q6IQ32 1131 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ZDHHC21Q8IVQ6 265 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 PRSS35Q8N3Z0 413 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 OR1N1Q8NGS0 311 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TRMT10AQ8TBZ6 339 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC39A7Q92504 469 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 C12orf43Q96C57 262 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SENP8Q96LD8 212 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ING2Q9H160 280 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ALG9Q9H6U8 611 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 GOLGA2P5Q9HBQ8 144 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF334Q9HCZ1 680 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TMEM138Q9NPI0 162 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 EQTNQ9NQ60 294 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 IMP3Q9NV31 184 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TMEM9Q9P0T7 183 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SMIM35A0A1B0GVV1 85 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ATP6AP2A0A1C7CYW4 349 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TLR4O00206 839 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SOCS2O14508 198 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 AZIN1O14977 448 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 INPP4BO15327 924 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RFPL2O75678 378 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ATP6AP2O75787 350 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ITGAMP11215 1152 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ZP3P21754 424 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 PGGT1BP53609 377 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RPS7P62081 194 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 IKZF1Q13422 519 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 IRF3Q14653 427 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 LCN8Q6JVE9 175 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 LPCAT3Q6P1A2 487 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SCIMPQ6UWF3 145 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 PDZD3Q86UT5 571 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 WDR5BQ86VZ2 330 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RYBPQ8N488 228 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TMEM186Q96B77 213 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 IGSF21Q96ID5 467 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RNF2Q99496 336 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 IL12RB2Q99665 862 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 SEPT5Q99719 369 aaPredicted RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 C1orf50Q9BV19 199 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 TMED9Q9BVK6 235 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 RAB1BQ9H0U4 201 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 MRPS18CQ9Y3D5 142 aaKnown RBP6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 ADAM18Q9Y3Q7 739 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 PLEKHM1Q9Y4G2 1056 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 BACE2Q9Y5Z0 518 aa6.2□□□□□ -1.42
TM9SF4-202ENST00000398022 FABP12A6NFH5 140 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 MGAT4DA6NG13 374 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 C4orf47A7E2U8 309 aa6.19□□□□□ -1.42
TM9SF4-202ENST00000398022 KLRC4-KLRK1H3BQV0 150 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms