RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 SLC3A1Q07837 685 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 C1orf94Q6P1W5 598 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 PLBD1Q6P4A8 553 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 TMEM91Q6ZNR0 172 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 OR13C5Q8NGS8 318 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 RAD51AP1Q96B01 352 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 SAMD8Q96LT4 415 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ZFP3Q96NJ6 502 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 NKIRAS2Q9NYR9 191 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ATG4BQ9Y4P1 393 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 E9PI62 339 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 QSOX1O00391 747 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 EIF4EP06730 217 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CD3GP09693 182 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 POLR2CP19387 275 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ACVR1BP36896 505 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 RAB40BQ12829 278 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CHMP1BQ7LBR1 199 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 IZUMO1Q8IYV9 350 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CCDC86Q9H6F5 360 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 HIDE1A8MVS5 230 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ERI3O43414 337 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 SNRNP200O75643 2136 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 LGI1O95970 557 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 MC3RP41968 323 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 AP2S1P53680 142 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 RPS7P62081 194 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 SNRPNP63162 240 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 VASNQ6EMK4 673 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 NUDT13Q86X67 352 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 OR4N5Q8IXE1 308 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 WDR34Q96EX3 536 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 LRRC3BQ96PB8 259 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 SLC38A2Q96QD8 506 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CAPN10Q9HC96 672 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 HINT3Q9NQE9 182 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ACAD8Q9UKU7 415 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 OR1A2Q9Y585 309 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 NOTCH4Q99466 2003 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 RFPL3O75679 317 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 HRGP04196 525 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 GYPBP06028 91 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 CXCL3P19876 107 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 RFX3P48380 749 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 CLDN20P56880 219 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 SMIM11AP58511 58 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 ZSWIM7Q19AV6 140 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 ZNF658BQ4V348 819 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-203ENST00000397763 CCNJQ5T5M9 372 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 TMEM99Q8N816 258 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 OR9A2Q8NGT5 310 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 GCDHQ92947 438 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-203ENST00000397763 RIT1Q92963 219 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 ORAI1Q96D31 301 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 OR51V1Q9H2C8 321 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 PLEKHM1Q9Y4G2 1056 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 CENPVL1A0A0U1RR11 272 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 HCN1O60741 890 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 WASP42768 502 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 PER3P56645 1201 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 GPR135Q8IZ08 494 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 LINC01555Q8NAE3 123 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 PIGKQ92643 395 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 FGF11Q92914 225 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 CNRIP1Q96F85 164 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-203ENST00000397763 OR52A5Q9H2C5 316 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 SLC35C2Q9NQQ7 365 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 ZC4H2Q9NQZ6 224 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 ENAMQ9NRM1 1142 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 WSB2Q9NYS7 404 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-203ENST00000397763 RASD1Q9Y272 281 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 CHST2Q9Y4C5 530 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 COL4A6Q14031 1691 aa12.87□□□□□ -0.35
COL6A2-203ENST00000397763 NPIPA5A0A0B4J1W7 369 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 PRRT4C9JH25 899 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 NPIPA7E9PJI5 369 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 FAM157BP0CG42 384 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 NPIPA8P0DM63 369 aa12.86□□□□□ -0.35
COL6A2-203ENST00000397763 CLUP10909 449 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms