RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CDRT15L2A8MXV6 281 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 hCG_2039718K7EN88 272 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 DBIP07108 87 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 ITGA2P17301 1181 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 TCN2P20062 427 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 TNFRSF1BP20333 461 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 CD82P27701 267 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 OR1E2P47887 323 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 NRF1Q16656 503 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 SLC29A4Q7RTT9 530 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 NLGN4XQ8N0W4 816 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 NLGN4YQ8NFZ3 816 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 NUBPLQ8TB37 319 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 OIT3Q8WWZ8 545 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 TP53INP1Q96A56 240 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 C8orf44Q96CB5 159 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 GPR87Q9BY21 358 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 AMBRA1Q9C0C7 1298 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 OR10H1Q9Y4A9 318 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 ENPP4Q9Y6X5 453 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 DOCK10Q96BY6 2186 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 IGHV1-45A0A0A0MS14 117 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 CENPVL1A0A0U1RR11 272 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 C21orf140B9A014 251 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 ACOX3O15254 700 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 UGT2B17O75795 530 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 IL33O95760 270 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 IFNW1P05000 195 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF26P17031 533 aaPredicted RBP18■□□□□ 0.47
PDLIM2-205ENST00000397761 EEF1A1P68104 462 aaKnown RBP18■□□□□ 0.47
PDLIM2-205ENST00000397761 RNF4P78317 190 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 GABREP78334 506 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 GPR68Q15743 365 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF141Q15928 474 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 NNATQ16517 81 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 MAPK14Q16539 360 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 RNF220Q5VTB9 566 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 VRK2Q86Y07 508 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 KBTBD2Q8IY47 623 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 TMBIM1Q969X1 311 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 EME1Q96AY2 570 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 NACC2Q96BF6 587 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 HSPBAP1Q96EW2 488 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 IMMP1LQ96LU5 166 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF347Q96SE7 839 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 ARHGDIGQ99819 225 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 OAZ3Q9UMX2 235 aa18■□□□□ 0.47
PDLIM2-205ENST00000397761 FARSAQ9Y285 508 aaKnown RBP18■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF443Q9Y2A4 671 aaPredicted RBP18■□□□□ 0.47
PDLIM2-205ENST00000397761 STMND1H3BQB6 276 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 DNAJB5O75953 348 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 SEC24DO94855 1032 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 COX6A1P12074 109 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 NID1P14543 1247 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 ATP6V1C1P21283 382 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 LCN1P31025 176 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 LARS2Q15031 903 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 DECR1Q16698 335 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 LRRC36Q1X8D7 754 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 HLA-DQA1Q5Y7H0 255 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 PPP4R4Q6NUP7 873 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 KIRREL2Q6UWL6 708 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 HSDL2Q6YN16 418 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF836Q6ZNA1 936 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 HMGN2P46Q86SG4 172 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF605Q86T29 641 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 CARM1Q86X55 608 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 ICA1LQ8NDH6 482 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 OR4D11Q8NGI4 311 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 CIB1Q99828 191 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 WFDC6Q9BQY6 131 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 C9orf16Q9BUW7 83 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 C8orf4Q9NR00 106 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 ACAD8Q9UKU7 415 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF232Q9UNY5 417 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 SLC9A8Q9Y2E8 581 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 PCSK5Q92824 1860 aa17.99■□□□□ 0.47
PDLIM2-205ENST00000397761 H0YJX3 145 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 PEX12O00623 359 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 SOCS6O14544 535 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 PRKNO60260 465 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 RAD1O60671 282 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 SEMA7AO75326 666 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 RHCEP18577 417 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 PSMD4P55036 377 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 DNASE1L3Q13609 305 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 GRAMD1BQ3KR37 738 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 FLYWCH1Q4VC44 716 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 LIN52Q52LA3 116 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 PPP1R32Q7Z5V6 425 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 MARCH9Q86YJ5 346 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 SVOPLQ8N434 492 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 PACRGLQ8N7B6 248 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 OR11G2Q8NGC1 345 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 ELP5Q8TE02 316 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 VPS50Q96JG6 964 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 GAL3ST4Q96RP7 486 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 LMF1Q96S06 567 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 ASCL3Q9NQ33 180 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 VNN3Q9NY84 501 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms