RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 EFHD1Q9BUP0 239 aa19.56■□□□□ 0.72
CPNE1-204ENST00000397443 CACYBPQ9HB71 228 aaKnown RBP19.56■□□□□ 0.72
CPNE1-204ENST00000397443 KCNE5Q9UJ90 142 aa19.56■□□□□ 0.72
CPNE1-204ENST00000397443 PCDHGA6Q9Y5G7 932 aa19.56■□□□□ 0.72
CPNE1-204ENST00000397443 KIAA0513O60268 411 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 PABPC4LP0CB38 370 aaKnown RBP19.55■□□□□ 0.72
CPNE1-204ENST00000397443 RAP2AP10114 183 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 IL7RP16871 459 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 CD247P20963 164 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 KCNJ10P78508 379 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 COMTD1Q86VU5 262 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 PEX5LQ8IYB4 626 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 OR5L2Q8NGL0 311 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 DUS3LQ96G46 650 aaKnown RBP19.55■□□□□ 0.72
CPNE1-204ENST00000397443 G6PC3Q9BUM1 346 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 SPATA5L1Q9BVQ7 753 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 SEMA6AQ9H2E6 1030 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 RLIMQ9NVW2 624 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 TMEM200CA6NKL6 621 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 DIRAS1O95057 198 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 FESP07332 822 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 ABCD3P28288 659 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 IL12BP29460 328 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 KRT20P35900 424 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 PUM1Q14671 1186 aaKnown RBP eCLIP19.55■□□□□ 0.72
CPNE1-204ENST00000397443 TBC1D25Q3MII6 688 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 AMIGO2Q86SJ2 522 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 LILRA2Q8N149 483 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 OR5M3Q8NGP4 307 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 VANGL1Q8TAA9 524 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-204ENST00000397443 PROX1Q92786 737 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 OMA1Q96E52 524 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 PKP2Q99959 881 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 ARMC1Q9NVT9 282 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 FLRT3Q9NZU0 649 aa19.55■□□□□ 0.72
CPNE1-204ENST00000397443 ZFHX4Q86UP3 3567 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 ZNF354AO60765 605 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-204ENST00000397443 UGT2B17O75795 530 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 ITGAMP11215 1152 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 KCNJ5P48544 419 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 Q0VFX4 171 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 IFI44LQ53G44 452 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 PDZK1Q5T2W1 519 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 ZDHHC21Q8IVQ6 265 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 NUBPLQ8TB37 319 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 M1APQ8TC57 530 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 WFDC6Q9BQY6 131 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 SAP130Q9H0E3 1048 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 ZBTB20Q9HC78 741 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-204ENST00000397443 STX18Q9P2W9 335 aaKnown RBP19.54■□□□□ 0.72
CPNE1-204ENST00000397443 BAG5Q9UL15 447 aa19.54■□□□□ 0.72
CPNE1-204ENST00000397443 ZNF443Q9Y2A4 671 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-204ENST00000397443 AGAP5A6NIR3 686 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 FRS3O43559 492 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 OR2J2O76002 312 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 HPP00738 406 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 YAP1P46937 504 aaKnown RBP19.53■□□□□ 0.72
CPNE1-204ENST00000397443 NRG3P56975 720 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 VLDLRP98155 873 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 ELOAQ14241 798 aaKnown RBP19.53■□□□□ 0.72
CPNE1-204ENST00000397443 OR4C3Q8NH37 302 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 HSPBAP1Q96EW2 488 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 MMP25Q9NPA2 562 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 MYOTQ9UBF9 498 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 A0A1W2PQ72 361 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 ACOX3O15254 700 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 PRKAR1AP10644 381 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 DCTP40126 519 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 FOXD4Q12950 439 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-204ENST00000397443 LARS2Q15031 903 aaKnown RBP19.53■□□□□ 0.72
CPNE1-204ENST00000397443 ZNF836Q6ZNA1 936 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 SLC34A3Q8N130 599 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 PQLC1Q8N2U9 271 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 CLIP4Q8N3C7 705 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 C17orf47Q8NEP4 570 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 OR8K3Q8NH51 312 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 ADAMTS17Q8TE56 1095 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 RASSF5Q8WWW0 418 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 DIO2Q92813 273 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 FAM122AQ96E09 287 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 MAGIXQ9H6Y5 334 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 POLE3Q9NRF9 147 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 MRTO4Q9UKD2 239 aaKnown RBP19.53■□□□□ 0.72
CPNE1-204ENST00000397443 ABCG2Q9UNQ0 655 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 ZNF232Q9UNY5 417 aa19.53■□□□□ 0.72
CPNE1-204ENST00000397443 PRAMEF25A6NGN4 478 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 M0R3H8 397 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 HNRNPRO43390 633 aaKnown RBP19.52■□□□□ 0.72
CPNE1-204ENST00000397443 MAN1A2O60476 641 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 IL33O95760 270 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 EPPINO95925 133 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 FABP3P05413 133 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 CLN3Q13286 438 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.52■□□□□ 0.72
CPNE1-204ENST00000397443 RBM45Q8IUH3 476 aaKnown RBP19.52■□□□□ 0.72
CPNE1-204ENST00000397443 PAPD5Q8NDF8 572 aaKnown RBP19.52■□□□□ 0.72
CPNE1-204ENST00000397443 TP53INP1Q96A56 240 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 NACC2Q96BF6 587 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 VPS50Q96JG6 964 aa19.52■□□□□ 0.72
CPNE1-204ENST00000397443 TRIM45Q9H8W5 580 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms