RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CASP9P55211 416 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 PER3P56645 1201 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 IRX1P78414 480 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 TIGD2Q4W5G0 525 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 TRILQ7L0X0 811 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 FJX1Q86VR8 437 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 PLCZ1Q86YW0 608 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 GOT1L1Q8NHS2 421 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 FAM110BQ8TC76 370 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 ITCHQ96J02 903 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 SERHLQ9NQF3 203 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 FLRT3Q9NZU0 649 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 PPP4R1LQ9P1A2 415 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 ZNF407Q9C0G0 2248 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 POLEQ07864 2286 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 DNAJC13O75165 2243 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 NCKAP5O14513 1909 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 NPIPA2E9PIF3 369 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 NPIPA3F8WFD2 350 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 CCL21O00585 134 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 FADS1O60427 444 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 HCN1O60741 890 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 STX5Q13190 355 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 SQLEQ14534 574 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 GRAMD1BQ3KR37 738 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 ATAD3BQ5T9A4 648 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 FNDC7Q5VTL7 733 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 OR5M10Q6IEU7 315 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 MARCH3Q86UD3 253 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 OR4K17Q8NGC6 315 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 OR5D16Q8NGK9 328 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 STON2Q8WXE9 905 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 VPS33AQ96AX1 596 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 RABEP2Q9H5N1 569 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 ACKR4Q9NPB9 350 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 EXD2Q9NVH0 621 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 CCDC167Q9P0B6 97 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 ZNF835Q9Y2P0 537 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 LIPGQ9Y5X9 500 aa23.16■■□□□ 1.3
TSPAN4-207ENST00000397411 SUSD5O60279 629 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 ZIC2O95409 532 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 AGR2O95994 175 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 IGHG3P01860 377 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 PTPN6P29350 595 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 LCN1P31025 176 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 GCKP35557 465 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 ATP4BP51164 291 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 SF3A3Q12874 501 aaKnown RBP eCLIP23.15■■□□□ 1.33e-13■■■■■ 49.7
TSPAN4-207ENST00000397411 C3AR1Q16581 482 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 AGKQ53H12 422 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 EXOSC6Q5RKV6 272 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 C6orf10Q5SRN2 563 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 DCST2Q5T1A1 773 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 MSANTD1Q6ZTZ1 278 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 XAGE5Q8WWM1 108 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 OR51I1Q9H343 314 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 UBQLN4Q9NRR5 601 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 PLSCR2Q9NRY7 297 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 SUCOQ9UBS9 1254 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 ACAD8Q9UKU7 415 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 KCNE3Q9Y6H6 103 aa23.15■■□□□ 1.3
TSPAN4-207ENST00000397411 SCDO00767 359 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 KRT75O95678 551 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 CDKN2CP42773 168 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 CA7P43166 264 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 MRPL19P49406 292 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 ANXA11P50995 505 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 ARFIP2P53365 341 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 SAXO2Q658L1 398 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 TNFAIP8L2Q6P589 184 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 C16orf62Q7Z3J2 963 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 FGD2Q7Z6J4 655 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 WDSUB1Q8N9V3 476 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 FAM57AQ8TBR7 257 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 DUSP19Q8WTR2 217 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 SARAFQ96BY9 339 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 NTNG2Q96CW9 530 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 NEURL3Q96EH8 262 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 TMEM120AQ9BXJ8 343 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 HOXD1Q9GZZ0 328 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 SLC6A15Q9H2J7 730 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 CCDC134Q9H6E4 229 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 FBXO34Q9NWN3 711 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 ERRFI1Q9UJM3 462 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 TINAGQ9UJW2 476 aa23.14■■□□□ 1.29
TSPAN4-207ENST00000397411 C15orf38-AP3S2A0A0A6YYH1 394 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 NR5A2O00482 541 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 AQP7O14520 342 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 OR12D1P0DN82 309 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 TBXA2RP21731 343 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 KHKP50053 298 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 MYO7BQ6PIF6 2116 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 DNAJC14Q6Y2X3 702 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 Q6ZPB1 254 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 YRDCQ86U90 279 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 EID3Q8N140 333 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 OR4C3Q8NH37 302 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 OR14L1PQ8NHC6 308 aa23.13■■□□□ 1.29
TSPAN4-207ENST00000397411 RELTQ969Z4 430 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms