RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 APOBEC4Q8WW27 367 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-204ENST00000397404 PIK3R3Q92569 461 aa17.61■□□□□ 0.41
TSPAN4-204ENST00000397404 ZNF300Q96RE9 604 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-204ENST00000397404 WDR77Q9BQA1 342 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-204ENST00000397404 ENPP4Q9Y6X5 453 aa17.61■□□□□ 0.41
TSPAN4-204ENST00000397404 IGHV1-45A0A0A0MS14 117 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 CDRT15L2A8MXV6 281 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 HS6ST1O60243 411 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 TPST1O60507 370 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 GFRA3O60609 400 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 RAD1O60671 282 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 TMED10P49755 219 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 PNLIPRP2P54317 469 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 ATP12AP54707 1039 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 DNASE1L3Q13609 305 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 COL9A2Q14055 689 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 ZNF141Q15928 474 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 TIPARPQ7Z3E1 657 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 RAB43Q86YS6 212 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 C9orf40Q8IXQ3 194 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 DND1Q8IYX4 353 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 BCORP1Q8N888 145 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 SMYD1Q8NB12 490 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 TOR1AIP2Q8NFQ8 470 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 CT55Q8WUE5 264 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 DIO2Q92813 273 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 EPYCQ99645 322 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 REEP1Q9H902 201 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 AKIRIN1Q9H9L7 192 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 MMP25Q9NPA2 562 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 UBQLN4Q9NRR5 601 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 FOXJ2Q9P0K8 574 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 MKLN1Q9UL63 735 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 ZNF443Q9Y2A4 671 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 SH3GLB1Q9Y371 365 aa17.6■□□□□ 0.41
TSPAN4-204ENST00000397404 FCMRO60667 390 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 FMO6PO60774 539 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 DNAJA1P31689 397 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 ADH7P40394 386 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 VLDLRP98155 873 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 EFR3AQ14156 821 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 GPR68Q15743 365 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 NRF1Q16656 503 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 FAAH2Q6GMR7 532 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 WDR53Q7Z5U6 358 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 ZNF440Q8IYI8 595 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 OR5K1Q8NHB7 308 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 OTUB1Q96FW1 271 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 RDH12Q96NR8 316 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 PIP5K1AQ99755 562 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 NDUFAF4Q9P032 175 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 SLC35A3Q9Y2D2 325 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 DTX4Q9Y2E6 619 aa17.59■□□□□ 0.41
TSPAN4-204ENST00000397404 NPIPB9F8W1W9 429 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 CDK2AP1O14519 115 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 IL12BP29460 328 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 PCOLCEQ15113 449 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 GRAMD1BQ3KR37 738 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 HMBOX1Q6NT76 420 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 PPP4R4Q6NUP7 873 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 ZBTB49Q6ZSB9 765 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 GALNT10Q86SR1 603 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 LINC00471Q8N535 108 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 GPR32P1Q8NGA4 272 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 ELP5Q8TE02 316 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 KIAA1143Q96AT1 154 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 ZNF184Q99676 751 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 ARHGDIGQ99819 225 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 NXF5Q9H1B4 397 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 ANKRD19PQ9H560 264 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 ACAD8Q9UKU7 415 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 HS3ST3B1Q9Y662 390 aa17.58■□□□□ 0.41
TSPAN4-204ENST00000397404 NSG1A0A0A6YYJ2 146 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 GXYLT2A0PJZ3 443 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 OR6C70A6NIJ9 312 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 H3BNH8 94 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 TERTO14746 1132 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 E2F6O75461 281 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 UGT2B17O75795 530 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 HPP00738 406 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 HPRP00739 348 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 COX6A1P12074 109 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 FPR1P21462 350 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 DCTP40126 519 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 HMGA2P52926 109 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 CLDN6P56747 220 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 EEF1A1P68104 462 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 EPS8Q12929 822 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 IQCCQ4KMZ1 466 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 SHQ1Q6PI26 577 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 FIGNL1Q6PIW4 674 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 AMIGO2Q86SJ2 522 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 RANBP3LQ86VV4 465 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 CARM1Q86X55 608 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 ICA1LQ8NDH6 482 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 PIK3C3Q8NEB9 887 aa17.57■□□□□ 0.4
TSPAN4-204ENST00000397404 SLC22A8Q8TCC7 542 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms