RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 GLSO94925 669 aaPredicted RBP12.54□□□□□ -0.4
SEC13-205ENST00000397101 KRT16P08779 473 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 CHI3L1P36222 383 aaPredicted RBP12.54□□□□□ -0.4
SEC13-205ENST00000397101 STT3AP46977 705 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 TRPC1P48995 793 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 RASSF2P50749 326 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 PRKAG1P54619 331 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 GPR85P60893 370 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 PPIAP62937 165 aaKnown RBP12.54□□□□□ -0.4
SEC13-205ENST00000397101 DUSP2Q05923 314 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 BNIP1Q12981 228 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 LTB4RQ15722 352 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 COQ5Q5HYK3 327 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 TMEM107Q6UX40 140 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 C16orf89Q6UX73 402 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 PAMR1Q6UXH9 720 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 ZNF771Q7L3S4 317 aaPredicted RBP12.54□□□□□ -0.4
SEC13-205ENST00000397101 RETREG3Q86VR2 466 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 SLC22A16Q86VW1 577 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 CDC20BQ86Y33 519 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 ST13P4Q8IZP2 240 aaPredicted RBP12.54□□□□□ -0.4
SEC13-205ENST00000397101 PSD4Q8NDX1 1056 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 ADCY4Q8NFM4 1077 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 OR10Q1Q8NGQ4 319 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 OR9A2Q8NGT5 310 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 KAT2AQ92830 837 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 RIT1Q92963 219 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 C18orf12Q96KH6 178 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 ZNF681Q96N22 645 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 CCDC115Q96NT0 180 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 DEFB127Q9H1M4 99 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 C3orf14Q9HBI5 128 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 SLC52A3Q9NQ40 469 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 NDE1Q9NXR1 346 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 Q9UFV3 132 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 YARS2Q9Y2Z4 477 aaKnown RBP12.54□□□□□ -0.4
SEC13-205ENST00000397101 PCDHGB3Q9Y5G1 929 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 DNAJC13O75165 2243 aa12.54□□□□□ -0.4
SEC13-205ENST00000397101 ZNF407Q9C0G0 2248 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 A0A096LPI6 279 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 SYNDIG1LA6NDD5 238 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 A6NNC1 897 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 AQP7O14520 342 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 SUSD5O60279 629 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 HNRNPCL1O60812 293 aaKnown RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 GOSR1O95249 250 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 T-ENOLP0DO92 83 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 HOXC12P31275 282 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 CDKN2CP42773 168 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 CDK9P50750 372 aaKnown RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 SSR4P51571 173 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 HBA1P69905 142 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 CAPRIN1Q14444 709 aaKnown RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 ZNF267Q14586 743 aaPredicted RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 DAZAP2Q15038 168 aaPredicted RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 MLC1Q15049 377 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 HYAL4Q2M3T9 481 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 DEFB113Q30KQ7 82 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 TRMT5Q32P41 509 aaKnown RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 RIPPLY2Q5TAB7 128 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 RTL6Q6ICC9 239 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 TRILQ7L0X0 811 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 LIX1LQ8IVB5 337 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 GALNT12Q8IXK2 581 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 OR5AK3PQ8NH89 298 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 LRRC58Q96CX6 371 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 ARSGQ96EG1 525 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 VMP1Q96GC9 406 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 CNPPD1Q9BV87 410 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 NEUROD4Q9HD90 331 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 DDX18Q9NVP1 670 aaKnown RBP12.53□□□□□ -0.4
SEC13-205ENST00000397101 CRIM1Q9NZV1 1036 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 BCAP29Q9UHQ4 241 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
SEC13-205ENST00000397101 TRBV11-1A0A0K0K1C0 115 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 RNF103-CHMP3A0A140T963 221 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 A8MVJ9 347 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 TGFBR3LH3BV60 316 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 GYG2O15488 501 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 SCN2BO60939 215 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 ATE1O95260 518 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 NPPAP01160 153 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 RAF1P04049 648 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 ATP1B1P05026 303 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 INHBBP09529 407 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 GABRA1P14867 456 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 UQCRC2P22695 453 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 MC3RP41968 323 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 FRKP42685 505 aaPredicted RBP12.52□□□□□ -0.41
SEC13-205ENST00000397101 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.41
SEC13-205ENST00000397101 GPR143P51810 404 aa12.52□□□□□ -0.41
SEC13-205ENST00000397101 IGLV3-21P80748 117 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms