RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OCLNQ16625 522 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 SYT16Q17RD7 645 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 GARNL3Q5VVW2 1013 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 RASSF6Q6ZTQ3 369 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 KIF18BQ86Y91 864 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 OR52R1Q8NGF1 315 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 HOXB13Q92826 284 aaPredicted RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 PMM1Q92871 262 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 BORCS5Q969J3 196 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 PEX11GQ96HA9 241 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 FAM46AQ96IP4 442 aaKnown RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 TGM7Q96PF1 710 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 PRRG3Q9BZD7 231 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 OCEL1Q9H607 264 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 TBC1D17Q9HA65 648 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 KRCC1Q9NPI7 259 aaPredicted RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 TVP23BQ9NYZ1 205 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 RPL36Q9Y3U8 105 aaKnown RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 HYKKA2RU49 373 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 SDC3O75056 442 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 SOX30O94993 753 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 INHBBP09529 407 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 FPR3P25089 353 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 CALRP27797 417 aaKnown RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 GABRA3P34903 492 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 OMPP47874 163 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 GABRA4P48169 554 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 SERPINB10P48595 397 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 ZNF136P52737 540 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 NCS1P62166 190 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 STX4Q12846 297 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 ZNHIT3Q15649 155 aaPredicted RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 MAPK14Q16539 360 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 MRPL2Q5T653 305 aaKnown RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 FIGNL1Q6PIW4 674 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 OGFOD3Q6PK18 319 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 DGAT2L6Q6ZPD8 337 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 MBOAT2Q6ZWT7 520 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 SLC46A3Q7Z3Q1 461 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 ZBTB46Q86UZ6 589 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 WDR36Q8NI36 951 aaKnown RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 CD180Q99467 661 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 PLA2G12AQ9BZM1 189 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 EGLN3Q9H6Z9 239 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 PDE7BQ9NP56 450 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 PRTFDC1Q9NRG1 225 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 TAS2R16Q9NYV7 291 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 CNIH4Q9P003 139 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 GXYLT2A0PJZ3 443 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 RHPN2P1A8MT19 583 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 EFCAB9A8MZ26 197 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 HRO43593 1189 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 PRKYO43930 277 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 BRINP1O60477 761 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 CTNSO60931 367 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 PIAS2O75928 621 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 DBTP11182 482 aaKnown RBP13.9□□□□□ -0.18
CBX3-202ENST00000396386 GIPRP48546 466 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 IGLV3-21P80748 117 aaPredicted RBP13.9□□□□□ -0.18
CBX3-202ENST00000396386 DGUOKQ16854 277 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 SLC25A30Q5SVS4 291 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 SLC27A4Q6P1M0 643 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 SLCO6A1Q86UG4 719 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
CBX3-202ENST00000396386 NKAIN4Q8IVV8 208 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 FAM26EQ8N5C1 309 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 C1orf216Q8TAB5 229 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 RPL3LQ92901 407 aaKnown RBP13.9□□□□□ -0.18
CBX3-202ENST00000396386 LMF2Q9BU23 707 aaKnown RBP13.9□□□□□ -0.18
CBX3-202ENST00000396386 TSSK6Q9BXA6 273 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 CHRNA10Q9GZZ6 450 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 RAB33BQ9H082 229 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 DSN1Q9H410 356 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 ARMC7Q9H6L4 198 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 FOLH1BQ9HBA9 442 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 SLC7A7Q9UM01 511 aa13.9□□□□□ -0.18
CBX3-202ENST00000396386 NPIPA5A0A0B4J1W7 369 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TRAPPC13A5PLN9 417 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 NPIPA7E9PJI5 369 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TGFBR3LH3BV60 316 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 PEX12O00623 359 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 CLDN4O14493 209 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 AIREO43918 545 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 THY1P04216 161 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 NPIPA8P0DM63 369 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 BCKDHBP21953 392 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 STAT5AP42229 794 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 FNTBP49356 437 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 MLLT10P55197 1068 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 C21orf59P57076 290 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 MAT1AQ00266 395 aaKnown RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 NR1D2Q14995 579 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 ZNF829Q3KNS6 432 aaPredicted RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 DYNC2LI1Q8TCX1 351 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 RIT1Q92963 219 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms