RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 HECTD2Q5U5R9 776 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 SLC27A4Q6P1M0 643 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 PLBD1Q6P4A8 553 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 SPRED2Q7Z698 418 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 PXKQ7Z7A4 578 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 ZNF687Q8N1G0 1237 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 LRR1Q96L50 414 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 PPP3R2Q96LZ3 170 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 HS6ST2Q96MM7 605 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 MICU1Q9BPX6 476 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 MGME1Q9BQP7 344 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 H2AFJQ9BTM1 129 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 ELOVL1Q9BW60 279 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 CLEC2DQ9UHP7 191 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 ELF5Q9UKW6 265 aaPredicted RBP7.96□□□□□ -1.13
NDE1-202ENST00000396355 RNF24Q9Y225 148 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 GOLT1BQ9Y3E0 138 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 PATJQ8NI35 1801 aa7.96□□□□□ -1.13
NDE1-202ENST00000396355 SMCO3A2RU48 225 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 FAM221BA6H8Z2 402 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 ANKRD61A6NGH8 418 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 MAGEB4O15481 346 aaPredicted RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 CHP2O43745 196 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 CNOT4O95628 575 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 NFYBP25208 207 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 TMEM44Q2T9K0 475 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 MANEAQ5SRI9 462 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 FAM171A1Q5VUB5 890 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 LETMD1Q6P1Q0 360 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 TMEM71Q6P5X7 295 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 SERPINA13PQ6UXR4 307 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 KCTD9Q7L273 389 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 BEST3Q8N1M1 668 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 MFSD8Q8NHS3 518 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 POC1BQ8TC44 478 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 RAB7BQ96AH8 199 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 TMEM41AQ96HV5 264 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 GPR22Q99680 433 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 CD244Q9BZW8 370 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 TKTL2Q9H0I9 626 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 PCDHB7Q9Y5E2 793 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 J3KR12 359 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 PSMD9O00233 223 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 KHNYNO15037 678 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 RRP8O43159 456 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 YIF1AO95070 293 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 GLP2RO95838 553 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 ANKRD34CP0C6C1 535 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 GPX3P22352 226 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 PCSK1P29120 753 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 AVPR2P30518 371 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 GNPDA1P46926 289 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 MAXP61244 160 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 SH3BP2P78314 561 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 BCDIN3DQ7Z5W3 292 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 STAG3L4Q8TBR4 150 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 PHYHIPQ92561 330 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 RTP3Q9BQQ7 232 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 PARP12Q9H0J9 701 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 TRPV4Q9HBA0 871 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 C3orf14Q9HBI5 128 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 TNFRSF12AQ9NP84 129 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 ZNF629Q9UEG4 869 aaPredicted RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 OR12D3Q9UGF7 316 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 PURGQ9UJV8 347 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 SARDHQ9UL12 918 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 TLR6Q9Y2C9 796 aa7.96□□□□□ -1.14
NDE1-202ENST00000396355 NOP16Q9Y3C1 178 aaKnown RBP7.96□□□□□ -1.14
NDE1-202ENST00000396355 URB1O60287 2271 aaKnown RBP7.95□□□□□ -1.14
NDE1-202ENST00000396355 SLC31A2O15432 143 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 F9P00740 461 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 SLC35G4P0C7Q5 338 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 DAOP14920 347 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 GABRB1P18505 474 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 VAMP1P23763 118 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 RPL29P47914 159 aaKnown RBP7.95□□□□□ -1.14
NDE1-202ENST00000396355 DAPP51397 102 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 TNK1Q13470 666 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 KCNC3Q14003 757 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 OR8G1Q15617 311 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 OR2G6Q5TZ20 316 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 OR5M10Q6IEU7 315 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 MRNIPQ6NTE8 343 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 FBXO42Q6P3S6 717 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 TPGS1Q6ZTW0 290 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 USP53Q70EK8 1073 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 RHOUQ7L0Q8 258 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 SPATA19Q7Z5L4 167 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 TMEM179BQ7Z7N9 219 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 TAC4Q86UU9 113 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 SYT12Q8IV01 421 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 JAGN1Q8N5M9 183 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 SLC5A8Q8N695 610 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 AQP11Q8NBQ7 271 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 RXFP4Q8TDU9 374 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 CNOT9Q92600 299 aaKnown RBP7.95□□□□□ -1.14
NDE1-202ENST00000396355 MRPS31Q92665 395 aaKnown RBP7.95□□□□□ -1.14
NDE1-202ENST00000396355 TBC1D20Q96BZ9 403 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 EDEM2Q9BV94 578 aa7.95□□□□□ -1.14
NDE1-202ENST00000396355 NT5MQ9NPB1 228 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms