RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 POGLUT1Q8NBL1 392 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 TMEM52Q8NDY8 209 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 C6orf62Q9GZU0 229 aaPredicted RBP15.65■□□□□ 0.1
NUP50-202ENST00000396096 IL20Q9NYY1 176 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 UGT2A1Q9Y4X1 527 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 OR5K3A6NET4 321 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 UPK1BO75841 260 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 AK1P00568 194 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 EIF2S1P05198 315 aaKnown RBP15.65■□□□□ 0.1
NUP50-202ENST00000396096 DBIP07108 87 aaKnown RBP15.65■□□□□ 0.1
NUP50-202ENST00000396096 S100A5P33763 92 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 NUDT1P36639 197 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 SOX3P41225 446 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 CRYBB2P43320 205 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 HOXC5Q00444 222 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 TMEM44Q2T9K0 475 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 PRICKLE4Q2TBC4 344 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 DCST2Q5T1A1 773 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 HOXB13Q92826 284 aaPredicted RBP15.65■□□□□ 0.1
NUP50-202ENST00000396096 ISYNA1Q9NPH2 558 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 MED17Q9NVC6 651 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 MAT2BQ9NZL9 334 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 STUB1Q9UNE7 303 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 NTNG1Q9Y2I2 539 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 RANBP2P49792 3224 aaKnown RBP15.65■□□□□ 0.1
NUP50-202ENST00000396096 TMEM129A0AVI4 362 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 STX11O75558 287 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 CELA2BP08218 269 aaPredicted RBP15.64■□□□□ 0.09
NUP50-202ENST00000396096 PSMA1P25786 263 aaKnown RBP15.64■□□□□ 0.09
NUP50-202ENST00000396096 RPS3AP61247 264 aaKnown RBP15.64■□□□□ 0.09
NUP50-202ENST00000396096 ID2Q02363 134 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 ZNF181Q2M3W8 571 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 PLEKHG7Q6ZR37 379 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 OOSP2Q86WS3 158 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 MEX3DQ86XN8 651 aaKnown RBP15.64■□□□□ 0.09
NUP50-202ENST00000396096 SNX29P2Q8IUI4 249 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 CACTIN-AS1Q8N1I8 211 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 OR9Q1Q8NGQ5 310 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 CTHRC1Q96CG8 243 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 NLGN3Q9NZ94 848 aa15.64■□□□□ 0.09
NUP50-202ENST00000396096 HYKKA2RU49 373 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 LDB3O75112 727 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 NTN1O95631 604 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 CPEP16870 476 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 CDH3P22223 829 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ETV5P41161 510 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ETV1P50549 477 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 RAB38P57729 211 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 SHC2P98077 582 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 PAQR6Q6TCH4 344 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ZNF620Q6ZNG0 422 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 TAF8Q7Z7C8 310 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 RANBP3LQ86VV4 465 aaPredicted RBP15.63■□□□□ 0.09
NUP50-202ENST00000396096 SFTPA2Q8IWL1 248 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 PHC2Q8IXK0 858 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 NRMQ8IXM6 262 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 TMEFF1Q8IYR6 380 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ARHGEF39Q8N4T4 335 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ANKK1Q8NFD2 765 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 OR5T3Q8NGG3 340 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 RNFT2Q96EX2 444 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 TOE1Q96GM8 510 aaKnown RBP15.63■□□□□ 0.09
NUP50-202ENST00000396096 SEMA6CQ9H3T2 930 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 EVA1AQ9H8M9 152 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ADAP2Q9NPF8 381 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 KRCC1Q9NPI7 259 aaPredicted RBP15.63■□□□□ 0.09
NUP50-202ENST00000396096 POLE3Q9NRF9 147 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 POMT2Q9UKY4 750 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 CENPVL1A0A0U1RR11 272 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 FMO6PO60774 539 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 THEGLP0DJG4 465 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 NID1P14543 1247 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 GNSP15586 552 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 NT5EP21589 574 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 BNC1Q01954 994 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 MLLT1Q03111 559 aaPredicted RBP15.63■□□□□ 0.09
NUP50-202ENST00000396096 MAP4K2Q12851 820 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 GPR68Q15743 365 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 MAPK14Q16539 360 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 CCNJQ5T5M9 372 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 OR4Q3Q8NH05 313 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 TMEM255BQ8WV15 326 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ANKRD9Q96BM1 317 aaPredicted RBP15.63■□□□□ 0.09
NUP50-202ENST00000396096 PRSS27Q9BQR3 290 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 ASPNQ9BXN1 380 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 TEX12Q9BXU0 123 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 EXOSC1Q9Y3B2 195 aaKnown RBP15.63■□□□□ 0.09
NUP50-202ENST00000396096 CDH10Q9Y6N8 788 aa15.63■□□□□ 0.09
NUP50-202ENST00000396096 KRBA1A5PL33 1030 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 TRAPPC13A5PLN9 417 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 ZNF670-ZNF695F2Z2N8 137 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 STK25O00506 426 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 SURF4O15260 269 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 SOX30O94993 753 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 GUSBP08236 651 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 MYL12AP19105 171 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 MTNR1AP48039 350 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 WNT4P56705 351 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 VSX2P58304 361 aaPredicted RBP15.62■□□□□ 0.09
NUP50-202ENST00000396096 COL9A2Q14055 689 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms