RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TBC1D1Q86TI0 1168 aaPredicted RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 NKAPQ8N5F7 415 aaKnown RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 NOA1Q8NC60 698 aaKnown RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 OR4K17Q8NGC6 315 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 UBE2E3Q969T4 207 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 RADILQ96JH8 1075 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 BTBD9Q96Q07 612 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 ADOQ96SZ5 270 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 RTN4RQ9BZR6 473 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 C12orf49Q9H741 205 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 NCF1BA6NI72 391 aaPredicted RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 NCF1CA8MVU1 366 aaPredicted RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 ZNF814B7Z6K7 855 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 ADAMDEC1O15204 470 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 NTN1O95631 604 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 ATP1B1P05026 303 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 NCF1P14598 390 aaPredicted RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 IL32P24001 234 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 PIK3R1P27986 724 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 PIK3CBP42338 1070 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 EIF1AXP47813 144 aaKnown RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 PDLIM4P50479 330 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 ITGADQ13349 1161 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 ZNF460Q14592 562 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 SGCBQ16585 318 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 EMBQ6PCB8 327 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 PLD6Q8N2A8 252 aaKnown RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 TCAIMQ8N3R3 496 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 OR4K14Q8NGD5 310 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 OR52B6Q8NGF0 335 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 OR10D3Q8NH80 312 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 C1GALT1C1Q96EU7 318 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 PIMREGQ9BSJ6 248 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 TSPYL1Q9H0U9 437 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 MED11Q9P086 117 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 CES1P1Q9UKY3 287 aa12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 UTP11Q9Y3A2 253 aaKnown RBP12.08□□□□□ -0.48
VCPKMT-201ENST00000395859 FADS1O60427 444 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 REM1O75628 298 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 KRT14P02533 472 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 PCNAP12004 261 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 COL6A2P12110 1019 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 CREB1P16220 341 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 PORP16435 677 aaPredicted RBP12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 PGAM1P18669 254 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 NT5EP21589 574 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 PNLIPRP2P54317 469 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 HILS1P60008 231 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 LGALS3BPQ08380 585 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 EFR3AQ14156 821 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 ZNF544Q6NX49 715 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 USP43Q70EL4 1123 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 NUFIP2Q7Z417 695 aaKnown RBP12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 TDRPQ86YL5 185 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 SNX31Q8N9S9 440 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 ADCY4Q8NFM4 1077 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 MAGOHBQ96A72 148 aaKnown RBP12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 C3orf49Q96BT1 292 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 MS4A14Q96JA4 679 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 FOXN4Q96NZ1 517 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 PRRG4Q9BZD6 226 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 OCEL1Q9H607 264 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 WDR41Q9HAD4 459 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 SMYD2Q9NRG4 433 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 PPP4R1LQ9P1A2 415 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 CTNNAL1Q9UBT7 734 aa12.07□□□□□ -0.48
VCPKMT-201ENST00000395859 EIF1AYO14602 144 aaKnown RBP12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 PGM3O95394 542 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 ADAP00813 363 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 IL2RGP31785 369 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 EVI2BP34910 448 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 VPS41P49754 854 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 RAP1GDS1P52306 607 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 DUSP2Q05923 314 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 SPOCK1Q08629 439 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 C2orf54Q08AI8 447 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 SLMAPQ14BN4 828 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 MORF4L2Q15014 288 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 PPA1Q15181 289 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 SULT1C3Q6IMI6 304 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 SHISA2Q6UWI4 295 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 NPSR1Q6W5P4 371 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 FRA10AC1Q70Z53 315 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 PEG10Q86TG7 708 aaKnown RBP12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 CCDC25Q86WR0 208 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 PDPRQ8NCN5 879 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 OR52R1Q8NGF1 315 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 PAQR5Q9NXK6 330 aaPredicted RBP12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 BCAP29Q9UHQ4 241 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms