RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 KIR2DS5A0A0G2JLQ3 304 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 A0A0G2JNG1 304 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 OR5K3A6NET4 321 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 OR5K4A6NMS3 321 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 KIR2DS3K7RE56 304 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 CSTAP01040 98 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 CSTF2P33240 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ARRB1P49407 418 aaPredicted RBP14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ENPP2Q13822 863 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 PDE7AQ13946 482 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 KIR2DS5Q14953 304 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC27A4Q6P1M0 643 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 DEFB123Q8N688 67 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 C19orf47Q8N9M1 422 aaKnown RBP14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 FBRSQ9HAH7 460 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 TUBA8Q9NY65 449 aaPredicted RBP14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SNTNA6NMZ2 147 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 FFAR1O14842 300 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 LRRTM2O43300 516 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ZNF217O75362 1048 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 OSMP13725 252 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 PSMA1P25786 263 aaKnown RBP14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 KIAA1024LP59773 190 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ZER1Q7Z7L7 766 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 OR4F15Q8NGB8 312 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 YTHDF1Q9BYJ9 559 aaKnown RBP14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 Q9N2J8 555 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 HMG20AQ9NP66 347 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 EVA1BQ9NVM1 165 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 MGAT4BQ9UQ53 548 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ZFHX2Q9C0A1 2572 aaPredicted RBP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 FAAHO00519 579 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 CDC40O60508 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC2A10O95528 541 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 GTF2E2P29084 291 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 LIPAP38571 399 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 OPRL1P41146 370 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 NAA10P41227 235 aaPredicted RBP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 SPANXN2Q5MJ10 180 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 ACSM5Q6NUN0 579 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 FAR1Q8WVX9 515 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 CTRCQ99895 268 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 HDHD5Q9BXW7 423 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 A0A087WUU8 490 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 BCKDHBP21953 392 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 SMSP52788 366 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 GP2P55259 537 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 GAS6Q14393 721 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 LAIR1Q6GTX8 287 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 MFSD12Q6NUT3 480 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 KRCC1Q9NPI7 259 aaPredicted RBP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 C17orf105B2RV13 164 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 MRPL19P49406 292 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 ZP2Q05996 745 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 BIKQ13323 160 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 CCINQ13939 588 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 FCRL6Q6DN72 434 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 OAFQ86UD1 273 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 NATD1Q8N6N6 113 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 WDR34Q96EX3 536 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 SPATA9Q9BWV2 254 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 COMMD3Q9UBI1 195 aa14.84□□□□□ -0.03
SMARCD1-202ENST00000394963 A0A0G2JPF8 293 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 PRAMEF27A3QJZ7 478 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 HNRNPCL2B2RXH8 293 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 HNRNPCL3B7ZW38 293 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 C11orf98E9PRG8 122 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CASKO14936 926 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 NDUFB5O43674 189 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CT62P0C5K7 136 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 HNRNPCL4P0DMR1 293 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 GIPRP48546 466 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CAV3P56539 151 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CCDC71Q8IV32 467 aaPredicted RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CPOQ8IVL8 374 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 SAMD14Q8IZD0 417 aaPredicted RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 OR4C6Q8NH72 309 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CD180Q99467 661 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 GAL3ST1Q99999 423 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 SMOC1Q9H4F8 434 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 MTCL1Q9Y4B5 1905 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 HCRTR2O43614 444 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 PRKYO43930 277 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 KCNJ13O60928 360 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 RPLP0P05388 317 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 PCBP4P57723 403 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 OR4K13Q8NH42 304 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 OR51Q1Q8NH59 317 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 CNOT9Q92600 299 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 SHDQ96IW2 340 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 HRASLS5Q96KN8 279 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 SECISBP2Q96T21 854 aaKnown RBP14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 SAP130Q9H0E3 1048 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 RACGAP1Q9H0H5 632 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 SIT1Q9Y3P8 196 aa14.83□□□□□ -0.04
SMARCD1-202ENST00000394963 IGHV5-51A0A0C4DH38 117 aa14.82□□□□□ -0.04
SMARCD1-202ENST00000394963 BCAT2O15382 392 aaPredicted RBP14.82□□□□□ -0.04
SMARCD1-202ENST00000394963 FCER2P06734 321 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms