RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 HSD17B3P37058 310 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 KRT6CP48668 564 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 NR1H2P55055 460 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 CLCQ05315 142 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 CSTF3Q12996 717 aaKnown RBP18.96■□□□□ 0.63
TRAF4-203ENST00000394925 HEPACAMQ14CZ8 416 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 LGSNQ5TDP6 509 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 SH2D5Q6ZV89 423 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 MARCH3Q86UD3 253 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 METTL25Q8N6Q8 603 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 C16orf78Q8WTQ4 265 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 BBS4Q96RK4 519 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 PRRG4Q9BZD6 226 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 MRPL46Q9H2W6 279 aaKnown RBP18.96■□□□□ 0.63
TRAF4-203ENST00000394925 NINJ2Q9NZG7 142 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 CLEC4AQ9UMR7 237 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 ABCG2Q9UNQ0 655 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 SHISA8B8ZZ34 492 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 GMFGO60234 142 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 COQ9O75208 318 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 CRLF1O75462 422 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 COL6A2P12110 1019 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 FCGR2AP12318 317 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 PPP3CBP16298 524 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 SLC7A5Q01650 507 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 TNK1Q13470 666 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 CYP27C1Q4G0S4 372 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 WFDC8Q8IUA0 241 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 PLPPR2Q96GM1 343 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 APIPQ96GX9 242 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 C1QTNF3Q9BXJ4 246 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 EBPLQ9BY08 206 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 ACPTQ9BZG2 426 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 PLSCR4Q9NRQ2 329 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 DMGDHQ9UI17 866 aaKnown RBP18.95■□□□□ 0.62
TRAF4-203ENST00000394925 EMC9Q9Y3B6 208 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 AP4B1Q9Y6B7 739 aa18.95■□□□□ 0.62
TRAF4-203ENST00000394925 ULK1O75385 1050 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 PLGP00747 810 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-203ENST00000394925 SBK3P0C264 359 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 EIF1AXP47813 144 aaKnown RBP18.94■□□□□ 0.62
TRAF4-203ENST00000394925 SLC6A8P48029 635 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 RFX3P48380 749 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 CLK3P49761 638 aaKnown RBP18.94■□□□□ 0.62
TRAF4-203ENST00000394925 CTBP2P56545 445 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 OCRLQ01968 901 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 ACSM2AQ08AH3 577 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 CAPRIN1Q14444 709 aaKnown RBP18.94■□□□□ 0.62
TRAF4-203ENST00000394925 DECR1Q16698 335 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 GLYR1Q49A26 553 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-203ENST00000394925 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 ACSM2BQ68CK6 577 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 STAC2Q6ZMT1 411 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 OR6K3Q8NGY3 331 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 ZDHHC18Q9NUE0 388 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 FAM120CQ9NX05 1096 aaKnown RBP18.94■□□□□ 0.62
TRAF4-203ENST00000394925 PYCARDQ9ULZ3 195 aa18.94■□□□□ 0.62
TRAF4-203ENST00000394925 ABCA1O95477 2261 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 EIF1AYO14602 144 aaKnown RBP18.93■□□□□ 0.62
TRAF4-203ENST00000394925 HS3ST1O14792 307 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 SUPT7LO94864 414 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 JUNP05412 331 aaKnown RBP18.93■□□□□ 0.62
TRAF4-203ENST00000394925 HMOX2P30519 316 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 TIA1P31483 386 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAF4-203ENST00000394925 HTR6P50406 440 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 NCBP2P52298 156 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAF4-203ENST00000394925 BTKQ06187 659 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 KRTAP1-1Q07627 177 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 RASA2Q15283 850 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 PRSS53Q2L4Q9 553 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 SPIN4Q56A73 249 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 TMEM107Q6UX40 140 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 GGNQ86UU5 652 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 TMEM151AQ8N4L1 468 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 ZNF611Q8N823 705 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 MAPK1IP1LQ8NDC0 245 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 METTL6Q8TCB7 284 aa18.93■□□□□ 0.62
TRAF4-203ENST00000394925 MYO1GB0I1T2 1018 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 TMCC2O75069 709 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 IL33O95760 270 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 SERPINB9P50453 376 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 UNC50Q53HI1 259 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 GPRIN3Q6ZVF9 776 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 CDC26Q8NHZ8 85 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 GMPPAQ96IJ6 420 aaPredicted RBP18.92■□□□□ 0.62
TRAF4-203ENST00000394925 PAFAH2Q99487 392 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 TBL1XR1Q9BZK7 514 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 ACTR6Q9GZN1 396 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 Q9N2J8 555 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 NFU1Q9UMS0 254 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 C19orf53Q9UNZ5 99 aaPredicted RBP18.92■□□□□ 0.62
TRAF4-203ENST00000394925 LAMP3Q9UQV4 416 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 VDAC3Q9Y277 283 aa18.92■□□□□ 0.62
TRAF4-203ENST00000394925 A0A087WV62 115 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 TRIM49D1C9J1S8 452 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 RNF223E7ERA6 249 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 ANXA4P09525 319 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-203ENST00000394925 C17orf67Q0P5P2 114 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 C2orf80Q0P641 193 aa18.91■□□□□ 0.62
TRAF4-203ENST00000394925 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms