RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 NDUFA9Q16795 377 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 TRMT12Q53H54 448 aaKnown RBP6.48□□□□□ -1.37
RTN4-205ENST00000394609 ANKRD34AQ69YU3 496 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 REEP3Q6NUK4 255 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 FAM111BQ6SJ93 734 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 TMEM64Q6YI46 380 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 TMPRSS9Q7Z410 1059 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 TMEM179BQ7Z7N9 219 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 STK32CQ86UX6 486 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 NUP43Q8NFH3 380 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 BPIFB6Q8NFQ5 453 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 OR7G2Q8NG99 324 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 OR4C6Q8NH72 309 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 SPPL2AQ8TCT8 520 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 DYNC2LI1Q8TCX1 351 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 MMABQ96EY8 250 aaPredicted RBP6.48□□□□□ -1.37
RTN4-205ENST00000394609 ZNF285Q96NJ3 590 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 CD180Q99467 661 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 DOHHQ9BU89 302 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 DUSP23Q9BVJ7 150 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 MMP27Q9H306 513 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 SYNDIG1Q9H7V2 258 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 C3orf14Q9HBI5 128 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 CAPN10Q9HC96 672 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 CCNB1IP1Q9NPC3 277 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 A4GALTQ9NPC4 353 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 ZSCAN32Q9NX65 697 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 VNN3Q9NY84 501 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 DNAJB9Q9UBS3 223 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 FBXO4Q9UKT5 387 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 ANGPT4Q9Y264 503 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 TMEM184BQ9Y519 407 aaPredicted RBP6.48□□□□□ -1.37
RTN4-205ENST00000394609 KCNE3Q9Y6H6 103 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 U3KQA8 63 aa6.48□□□□□ -1.37
RTN4-205ENST00000394609 ZNF99A8MXY4 864 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 G3V2T6 193 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 EMC8O43402 210 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SNAP29O95721 258 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SEMG1P04279 462 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 FABP3P05413 133 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SP9P0CG40 484 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 TRAPPC2P0DI81 140 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 TRAPPC2BP0DI82 140 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 NR2F1P10589 423 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 NT5EP21589 574 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SOX18P35713 384 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 UGT2B10P36537 528 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 MAGEA2P43356 314 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 OR1D4P47884 311 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 TPTEP56180 551 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 PCBP3P57721 371 aaKnown RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 RAB38P57729 211 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 BTG2P78543 158 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 CCL7P80098 99 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 IFITM2Q01629 132 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 ZNF45Q02386 682 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 AQP6Q13520 282 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 DUSP7Q16829 419 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 INAVAQ3KP66 663 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 CRB2Q5IJ48 1285 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 CCNJQ5T5M9 372 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SYT6Q5T7P8 510 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 TCEAL6Q6IPX3 200 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 WDR74Q6RFH5 385 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 ZNF574Q6ZN55 896 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 TTLL10Q6ZVT0 673 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SLCO6A1Q86UG4 719 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 WFDC8Q8IUA0 241 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 ZDHHC13Q8IUH4 622 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 PEX5LQ8IYB4 626 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SAMD14Q8IZD0 417 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 OFCC1Q8IZS5 231 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 RCBTB1Q8NDN9 531 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 CHDHQ8NE62 594 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 ZNF555Q8NEP9 628 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 OR56A1Q8NGH5 318 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 OR1L3Q8NH93 324 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 GRPEL2Q8TAA5 225 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 TCEAL3Q969E4 200 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 TRIM63Q969Q1 353 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 ANKRD9Q96BM1 317 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 SDCCAG3Q96C92 435 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 C7orf34Q96L11 122 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 MUS81Q96NY9 551 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 NODALQ96S42 347 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 BARD1Q99728 777 aaKnown RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 TREX2Q9BQ50 279 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 RSPO3Q9BXY4 272 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 SMURF2Q9HAU4 748 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 DIABLOQ9NR28 239 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 DHCR7Q9UBM7 475 aaKnown RBP6.47□□□□□ -1.37
RTN4-205ENST00000394609 NDOR1Q9UHB4 597 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 SATB2Q9UPW6 733 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 UNC13CQ8NB66 2214 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 PI4KAP42356 2102 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.47□□□□□ -1.37
RTN4-205ENST00000394609 A0A1W2PQM1 296 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms