RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 POLMQ9NP87 494 aaPredicted RBP12.77□□□□□ -0.36
USP49-203ENST00000394253 FMN2Q9NZ56 1722 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 NEMP2A6NFY4 417 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 TNFP01375 233 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 SERPINA5P05154 406 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 THBS1P07996 1170 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 POU3F4P49335 361 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 HOXA1P49639 335 aaPredicted RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 EIF4HQ15056 248 aaKnown RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 SFRP4Q6FHJ7 346 aaPredicted RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 TMIGD1Q6UXZ0 262 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 IFI44Q8TCB0 444 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 SLC5A11Q8WWX8 675 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 FAM46AQ96IP4 442 aaKnown RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 TCAPO15273 167 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 GLSO94925 669 aaPredicted RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 CA5AP35218 305 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 MLLT10P55197 1068 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 PXT1Q8NFP0 134 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 GAB3Q8WWW8 586 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 EIF3FO00303 357 aaPredicted RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 SYPP08247 313 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 VIPR1P32241 457 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 IRF9Q00978 393 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 GPR176Q14439 515 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 C1orf52Q8N6N3 182 aaKnown RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 GPR19Q15760 415 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 SLC15A4Q8N697 577 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 RBMXL3Q8N7X1 1067 aaKnown RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 OR7G3Q8NG95 312 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 OR4K14Q8NGD5 310 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 OR9K2Q8NGE7 335 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 TFGQ92734 400 aaPredicted RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
USP49-203ENST00000394253 CRB1P82279 1406 aa12.77□□□□□ -0.37
USP49-203ENST00000394253 HNRNPDQ14103 355 aaKnown RBP12.76□□□□□ -0.37
USP49-203ENST00000394253 RNF212Q495C1 297 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 KIAA0895LQ68EN5 471 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 DDIT4LQ96D03 193 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 PCDHB3Q9Y5E6 796 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 ECI1P42126 302 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TPMTP51580 245 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 WNT4P56705 351 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 CRMP1Q14194 572 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 OR4F3Q6IEY1 312 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 ETFRF1Q6IPR1 90 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 OR5H6Q8NGV6 325 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 CUTCQ9NTM9 273 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 SLC35D1Q9NTN3 355 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 KDELR2P33947 212 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 MC3RP41968 323 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 DNAJB13P59910 316 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
USP49-203ENST00000394253 ADIPOR2Q86V24 386 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TECTBQ96PL2 329 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 EBF1Q9UH73 591 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TGM5O43548 720 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 CSTAP01040 98 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 SCNN1AP37088 669 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 GBX1Q14549 363 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 STEAP3Q658P3 488 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TMEM71Q6P5X7 295 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 SHFQ7M4L6 423 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 OR4N5Q8IXE1 308 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 IL17RDQ8NFM7 739 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 OR7D2Q96RA2 312 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 U3KQ87 197 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TRIOBPQ9H2D6 2365 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 GLO1Q04760 184 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 LBHQ53QV2 105 aaPredicted RBP12.76□□□□□ -0.37
USP49-203ENST00000394253 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
USP49-203ENST00000394253 MCHR1Q99705 422 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 ST6GALNAC5Q9BVH7 336 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 NAV1Q8NEY1 1877 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 VEGFDO43915 354 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 EGFP01133 1207 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 SYN1P17600 705 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 RHOUQ7L0Q8 258 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 FAM213BQ8TBF2 198 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 ZNF582Q96NG8 517 aaPredicted RBP12.76□□□□□ -0.37
USP49-203ENST00000394253 MEIS3P2A8K0S8 358 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 LRCH4O75427 683 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TXNDC12O95881 172 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 CKMT1AP12532 417 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 BDKRB1P46663 353 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 APOFQ13790 326 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 OR1F2PQ96R84 312 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 DERL2Q9GZP9 239 aa12.76□□□□□ -0.37
USP49-203ENST00000394253 TRAV18A0A075B6X5 111 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 LGALS2P05162 132 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms