RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PM20D2Q8IYS1 436 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 NATD1Q8N6N6 113 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 SLC16A11Q8NCK7 471 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 DTNBP1Q96EV8 351 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 CHMP6Q96FZ7 201 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 DUSP26Q9BV47 211 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 PRDM14Q9GZV8 571 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 RUBCNLQ9H714 662 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 FAM120CQ9NX05 1096 aaKnown RBP27.96■■■□□ 2.07
CMTM4-202ENST00000394106 Q9UFV3 132 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 CELSR2Q9HCU4 2923 aa27.96■■■□□ 2.07
CMTM4-202ENST00000394106 ARHGAP21Q5T5U3 1957 aa27.95■■■□□ 2.07
CMTM4-202ENST00000394106 CFLARO15519 480 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 ALOX5P09917 674 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 SRD5A2P31213 254 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 PRIM2P49643 509 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 CLK3P49761 638 aaKnown RBP27.95■■■□□ 2.06
CMTM4-202ENST00000394106 DUSP5Q16690 384 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 ACSF3Q4G176 576 aaPredicted RBP27.95■■■□□ 2.06
CMTM4-202ENST00000394106 MARCH3Q86UD3 253 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 IFNEQ86WN2 208 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 WDYHV1Q96HA8 205 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 BHLHE41Q9C0J9 482 aaPredicted RBP27.95■■■□□ 2.06
CMTM4-202ENST00000394106 SDHAF3Q9NRP4 125 aa27.95■■■□□ 2.06
CMTM4-202ENST00000394106 B4DXG7 233 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 ACTL6AO96019 429 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 ZFP36L2P47974 494 aaKnown RBP27.94■■■□□ 2.06
CMTM4-202ENST00000394106 SLC18A1P54219 525 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 GRAMD1BQ3KR37 738 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 FIGNL1Q6PIW4 674 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 TBL1XR1Q9BZK7 514 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 RTN4RQ9BZR6 473 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 DSN1Q9H410 356 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 CXorf36Q9H7Y0 433 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 MEAF6Q9HAF1 191 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 KCNJ16Q9NPI9 418 aa27.94■■■□□ 2.06
CMTM4-202ENST00000394106 KDM4EB2RXH2 506 aaPredicted RBP27.93■■■□□ 2.06
CMTM4-202ENST00000394106 FAM47E-STBD1D6RA91 191 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 HMGN2P05204 90 aaKnown RBP27.93■■■□□ 2.06
CMTM4-202ENST00000394106 PRF1P14222 555 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 LBPP18428 481 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 DPP4P27487 766 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 CCT3P49368 545 aaKnown RBP27.93■■■□□ 2.06
CMTM4-202ENST00000394106 WNT3P56703 355 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 C21orf58P58505 322 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 TP53BP2Q13625 1128 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 LASP1Q14847 261 aaKnown RBP27.93■■■□□ 2.06
CMTM4-202ENST00000394106 ZCCHC12Q6PEW1 402 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 TRIM42Q8IWZ5 723 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 MCEMP1Q8IX19 187 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 COX18Q8N8Q8 333 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 DPY30Q9C005 99 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 THAP1Q9NVV9 213 aa27.93■■■□□ 2.06
CMTM4-202ENST00000394106 RPH3AQ9Y2J0 694 aaPredicted RBP27.93■■■□□ 2.06
CMTM4-202ENST00000394106 RIPPLY2Q5TAB7 128 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 ATG16L1Q676U5 607 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 SEM1Q6ZVN7 128 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 OR56A1Q8NGH5 318 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 PSMA8Q8TAA3 256 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 SFXN2Q96NB2 322 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 TRIB1Q96RU8 372 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 MED11Q9P086 117 aa27.92■■■□□ 2.06
CMTM4-202ENST00000394106 MARCOQ9UEW3 520 aaPredicted RBP27.92■■■□□ 2.06
CMTM4-202ENST00000394106 SNNO75324 88 aaPredicted RBP27.91■■■□□ 2.06
CMTM4-202ENST00000394106 KCNK2O95069 426 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 EPPINO95925 133 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 KITP10721 976 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 SOAT1P35610 550 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 SRYQ05066 204 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 SF3B4Q15427 424 aaKnown RBP eCLIP27.91■■■□□ 2.06
CMTM4-202ENST00000394106 OR4F3Q6IEY1 312 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 ENPP6Q6UWR7 440 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 CAMKMTQ7Z624 323 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 FADS6Q8N9I5 356 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 OR2M3Q8NG83 312 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 DUSP19Q8WTR2 217 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 NEUROD4Q9HD90 331 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 MED12Q93074 2177 aa27.91■■■□□ 2.06
CMTM4-202ENST00000394106 TOXO94900 526 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 GFRA1P56159 465 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 DSCR4P56555 118 aaPredicted RBP27.9■■■□□ 2.06
CMTM4-202ENST00000394106 CCNJQ5T5M9 372 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 AAGABQ6PD74 315 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 LACC1Q8IV20 430 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 LIX1LQ8IVB5 337 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 TNIP2Q8NFZ5 429 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 OR5AK3PQ8NH89 298 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 CDS1Q92903 461 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 ARL8AQ96BM9 186 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 MANSC1Q9H8J5 431 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 FBXO34Q9NWN3 711 aa27.9■■■□□ 2.06
CMTM4-202ENST00000394106 FAF1Q9UNN5 650 aaPredicted RBP27.9■■■□□ 2.06
CMTM4-202ENST00000394106 MRPS18CQ9Y3D5 142 aaKnown RBP27.9■■■□□ 2.06
CMTM4-202ENST00000394106 H0Y3Z8 333 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 GMFGO60234 142 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 ZIC3O60481 467 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 ANGPTL1O95841 491 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 STARP49675 285 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 HBA1P69905 142 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 POU6F2P78424 691 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms