RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 F3P13726 295 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 IFNA8P32881 189 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 AHRP35869 848 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 STXBP1P61764 594 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 DSG2Q14126 1118 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 IRF4Q15306 451 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ZIC1Q15915 447 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 PGGHGQ32M88 737 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF57Q68EA5 555 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC48A1Q6P1K1 146 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 CD200R1LQ6Q8B3 271 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SMARCD3Q6STE5 483 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 GDF7Q7Z4P5 450 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SIRT6Q8N6T7 355 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ARIH2OSQ8N7S6 290 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 POGLUT1Q8NBL1 392 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 RFKQ969G6 155 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ARSGQ96EG1 525 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 WACQ9BTA9 647 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 RNF32Q9H0A6 362 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 RMI1Q9H9A7 625 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 HINT3Q9NQE9 182 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 MAU2Q9Y6X3 613 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 UNC80Q8N2C7 3258 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 A0A1B0GVC2 190 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 A6NIN4 97 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ISM1B1AKI9 464 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 CDC42EP2O14613 210 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 LYRM1O43325 122 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 MPIP34949 423 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 DRD3P35462 400 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM78AQ5JUQ0 283 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 IL20RBQ6UXL0 311 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC16A11Q8NCK7 471 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 OSTF1Q92882 214 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC35A4Q96G79 324 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 RPRD1BQ9NQG5 326 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 KLHL28Q9NXS3 571 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 PTGFRNQ9P2B2 879 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ACSL5Q9ULC5 683 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 HCN1O60741 890 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 NFATC1O95644 943 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 PRKAR1AP10644 381 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 ALAS2P22557 587 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 SOX9P48436 509 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 EVX1P49640 407 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 SNRPNP63162 240 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 BTN3A2P78410 334 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 CSTF1Q05048 431 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 CAMK1Q14012 370 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 LRRC32Q14392 662 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 IDNKQ5T6J7 187 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 MRM1Q6IN84 353 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM111BQ6SJ93 734 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 TTLQ8NG68 377 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 OR2L5Q8NG80 312 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 ACOT11Q8WXI4 607 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 CDS1Q92903 461 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 UPRTQ96BW1 309 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 SMAD5Q99717 465 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 BTBD1Q9H0C5 482 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 RBFOX1Q9NWB1 397 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 TNFRSF10DQ9UBN6 386 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 CES1P1Q9UKY3 287 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 CBLCQ9ULV8 474 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 MDC1Q14676 2089 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 SCN2AQ99250 2005 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 SYT5O00445 386 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 PKLRP30613 574 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 GCGRP47871 477 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 HTRA4P83105 476 aaPredicted RBP13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 EFR3AQ14156 821 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 VASNQ6EMK4 673 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 MZT2BQ6NZ67 158 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 PLBD1Q6P4A8 553 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 PRR23CQ6ZRP0 262 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 KCT2Q8NC54 265 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 HDAC8Q9BY41 377 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
GAPVD1-205ENST00000394084 CENPVL1A0A0U1RR11 272 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 GSAPA4D1B5 854 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 ASGR2P07307 311 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 CPN2P22792 545 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 FPR3P25089 353 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 SNRPD2P62316 118 aaKnown RBP13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 CCNJQ5T5M9 372 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF620Q6ZNG0 422 aa13.02□□□□□ -0.32
GAPVD1-205ENST00000394084 TMEM91Q6ZNR0 172 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms