RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 AGR2O95994 175 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 IGHG3P01860 377 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 GSNP06396 782 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 ATP6V1C1P21283 382 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 PTGS2P35354 604 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 ARFIP2P53365 341 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 RPS26P62854 115 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 TOMM20Q15388 145 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 AGKQ53H12 422 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 BLOC1S3Q6QNY0 202 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 TRILQ7L0X0 811 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 GALNT10Q86SR1 603 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 PLCZ1Q86YW0 608 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 MIPOL1Q8TD10 442 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 VPS33AQ96AX1 596 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 DTNBP1Q96EV8 351 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 TMEM120AQ9BXJ8 343 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 TBL1XR1Q9BZK7 514 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 EXO5Q9H790 373 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 EXD2Q9NVH0 621 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 FLRT3Q9NZU0 649 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 CCDC167Q9P0B6 97 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 ZNF835Q9Y2P0 537 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 KCNE3Q9Y6H6 103 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 ZNF407Q9C0G0 2248 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 TRGV5A0A0B4J1U4 118 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 TRGV8A0A0C4DH27 118 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 A0A1B0GUH1 482 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 SCO2O43819 266 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 SUSD5O60279 629 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 HCN1O60741 890 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 DNAJC13O75165 2243 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 CELA3AP09093 270 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 PTPN6P29350 595 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 CDKN2CP42773 168 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 TRPC1P48995 793 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 GAS1P54826 345 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 GRAMD1BQ3KR37 738 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 DCST2Q5T1A1 773 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 CCNJQ5T5M9 372 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 TENM4Q6N022 2769 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 FUNDC1Q8IVP5 155 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 FAM26EQ8N5C1 309 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 WDSUB1Q8N9V3 476 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 OR5D16Q8NGK9 328 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 OR51I1Q9H343 314 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 SERHLQ9NQF3 203 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 FBXO34Q9NWN3 711 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 SLC5A6Q9Y289 635 aa17.34■□□□□ 0.37
PDLIM7-204ENST00000393546 A0A1B0GVC2 190 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 PRRG2O14669 202 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 ZNHIT1O43257 154 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 LRRTM2O43300 516 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 AGFG2O95081 481 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 KRT75O95678 551 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 AK1P00568 194 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 HPNP05981 417 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 NGFRP08138 427 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 ZCCHC18P0CG32 403 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 OR12D1P0DN82 309 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 HPGDP15428 266 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 TBXA2RP21731 343 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 ANXA11P50995 505 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 CASP9P55211 416 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 UBAP2LQ14157 1087 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 RCAN2Q14206 197 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 C4orf17Q53FE4 359 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 C6orf10Q5SRN2 563 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 ATAD3BQ5T9A4 648 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 C1QL3Q5VWW1 255 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 OR5M10Q6IEU7 315 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 Q6ZPB1 254 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 FGD2Q7Z6J4 655 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 MARCH3Q86UD3 253 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 CHERPQ8IWX8 916 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 OR4C3Q8NH37 302 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 XAGE5Q8WWM1 108 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 SPDL1Q96EA4 605 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 HOXD1Q9GZZ0 328 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 UBQLN3Q9H347 655 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 SERHL2Q9H4I8 314 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 HHATLQ9HCP6 504 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 UBQLN4Q9NRR5 601 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 PPP4R1LQ9P1A2 415 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 LIPGQ9Y5X9 500 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 FREM3P0C091 2139 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 FLNCQ14315 2725 aa17.33■□□□□ 0.36
PDLIM7-204ENST00000393546 NCKAP5O14513 1909 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 NR5A2O00482 541 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 SCDO00767 359 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 AQP7O14520 342 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 SEMA7AO75326 666 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 OXSR1O95747 527 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 CA7P43166 264 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 KHKP50053 298 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 TXNL4AP83876 142 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 C17orf67Q0P5P2 114 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.369e-8■■■■■ 56.8
PDLIM7-204ENST00000393546 CGB2Q6NT52 195 aa17.32■□□□□ 0.36
PDLIM7-204ENST00000393546 TNFAIP8L2Q6P589 184 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms