RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 GPAT3Q53EU6 434 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 SOWAHCQ53LP3 525 aaPredicted RBP13.68□□□□□ -0.22
SUMO1-203ENST00000392246 NANOGP8Q6NSW7 305 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 SLC30A6Q6NXT4 461 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.68□□□□□ -0.22
SUMO1-203ENST00000392246 ZAR1Q86SH2 424 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 OR2M7Q8NG81 312 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 GRHL3Q8TE85 626 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 TRNT1Q96Q11 434 aaKnown RBP13.68□□□□□ -0.22
SUMO1-203ENST00000392246 FAM173AQ9BQD7 235 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 DOHHQ9BU89 302 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 ANGPTL4Q9BY76 406 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 HOXD1Q9GZZ0 328 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 IKZF5Q9H5V7 419 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 NANOGQ9H9S0 305 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 POLE3Q9NRF9 147 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 DEPPQ9NTK1 212 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 KLRF1Q9NZS2 232 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 P2RX2Q9UBL9 471 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 TAGLN3Q9UI15 199 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 ABCG2Q9UNQ0 655 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 TMEM247A6NEH6 219 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 PRAMEF25A6NGN4 478 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 EIF4E1BA6NMX2 242 aaKnown RBP13.67□□□□□ -0.22
SUMO1-203ENST00000392246 G3V3Y1 287 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 FXYD1O00168 92 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 GUSBP08236 651 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 NR2F1P10589 423 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 CLK3P49761 638 aaKnown RBP13.67□□□□□ -0.22
SUMO1-203ENST00000392246 MEOX1P50221 254 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 MTPNP58546 118 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 KCNJ2P63252 427 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 HPCAP84074 193 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 FUT5Q11128 374 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 COLEC12Q5KU26 742 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 BICRALQ6AI39 1079 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 HACD2Q6Y1H2 254 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 RNF138Q8WVD3 245 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 SLC39A3Q9BRY0 314 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 OSBPL11Q9BXB4 747 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 ZNF350Q9GZX5 532 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 UBQLN4Q9NRR5 601 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 ARL8BQ9NVJ2 186 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 FLRT3Q9NZU0 649 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 SPTA1P02549 2419 aa13.67□□□□□ -0.22
SUMO1-203ENST00000392246 PRAMEF27A3QJZ7 478 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 FADS1O60427 444 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 FCMRO60667 390 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 TNFRSF21O75509 655 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 NGFRP08138 427 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 TFPTP0C1Z6 253 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 HPGDP15428 266 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 TBXA2RP21731 343 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 PTGDSP41222 190 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 DNASE1L1P49184 302 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 NUDT2P50583 147 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 SELPLGQ14242 412 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 GNA13Q14344 377 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 SYPL1Q16563 259 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 FLYWCH1Q4VC44 716 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 GCNT6Q5T4J0 391 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 TRPM8Q7Z2W7 1104 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 PACS2Q86VP3 889 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 POGLUT1Q8NBL1 392 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 OR4C3Q8NH37 302 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 HOPXQ9BPY8 73 aaPredicted RBP13.66□□□□□ -0.22
SUMO1-203ENST00000392246 TBL1XR1Q9BZK7 514 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 TRIM8Q9BZR9 551 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 KAT8Q9H7Z6 458 aaKnown RBP13.66□□□□□ -0.22
SUMO1-203ENST00000392246 WDR45Q9Y484 360 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.66□□□□□ -0.22
SUMO1-203ENST00000392246 FAM208BQ5VWN6 2430 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 ZFYVE26Q68DK2 2539 aa13.66□□□□□ -0.22
SUMO1-203ENST00000392246 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 A0A0G2JMM0 328 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 A0A1W2PPB8 328 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 TTLL8A6PVC2 850 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 KIR3DP1A8MWS1 328 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 SCDO00767 359 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 SLC28A2O43868 658 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 H6PDO95479 791 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 OXSR1O95747 527 aaPredicted RBP13.65□□□□□ -0.22
SUMO1-203ENST00000392246 NUDT7P0C024 238 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 DCTP40126 519 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 CPA2P48052 419 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 MNAT1P51948 309 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 ATP12AP54707 1039 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 GPR68Q15743 365 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
SUMO1-203ENST00000392246 FRRS1Q6ZNA5 592 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 LRRC74BQ6ZQY2 392 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 ARPINQ7Z6K5 226 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 C10orf111Q8N326 155 aa13.65□□□□□ -0.22
SUMO1-203ENST00000392246 CISD2Q8N5K1 135 aaKnown RBP13.65□□□□□ -0.22
SUMO1-203ENST00000392246 ANKFN1Q8N957 763 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms