RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 VSTM2LQ96N03 204 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 TESK2Q96S53 571 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 MRPL13Q9BYD1 178 aaKnown RBP2.44□□□□□ -2.02
PTPRC-205ENST00000391970 PUS3Q9BZE2 481 aaKnown RBP2.44□□□□□ -2.02
PTPRC-205ENST00000391970 UBXN6Q9BZV1 441 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 SLC35D1Q9NTN3 355 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 CLEC5AQ9NY25 188 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 IL20Q9NYY1 176 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF581Q9P0T4 197 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 ARMCX1Q9P291 453 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 RSPH14Q9UHP6 348 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 B9D1Q9UPM9 204 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 NOSIPQ9Y314 301 aaKnown RBP2.44□□□□□ -2.02
PTPRC-205ENST00000391970 EXOSC1Q9Y3B2 195 aaKnown RBP2.44□□□□□ -2.02
PTPRC-205ENST00000391970 CSAG2Q9Y5P2 127 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 EIF3AQ14152 1382 aaKnown RBP2.44□□□□□ -2.02
PTPRC-205ENST00000391970 MAP3K5Q99683 1374 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 CFAP43Q8NDM7 1665 aa2.44□□□□□ -2.02
PTPRC-205ENST00000391970 FHAD1B1AJZ9 1412 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ABCA10Q8WWZ4 1543 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 TRBV7-9A0A0J9YWB2 115 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 E9PAM4 449 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF253O75346 499 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ERLIN1O75477 346 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 OR4F21O95013 312 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 GUCA1CO95843 209 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 GSTT2P0CG29 244 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 GSTT2BP0CG30 244 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CALCBP10092 127 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF24P17028 368 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 TNNI3P19429 210 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 BCL3P20749 454 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 GATA2P23769 480 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CYLC1P35663 651 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 NAPAP54920 295 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 SLC8A3P57103 927 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CRMP1Q14194 572 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 RAB35Q15286 201 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 LTB4RQ15722 352 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 PPP1R3AQ16821 1122 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 MICAQ29983 383 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 DCAF4L1Q3SXM0 396 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CYBRD1Q53TN4 286 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 RIPPLY2Q5TAB7 128 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 AP1ARQ63HQ0 302 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 LRRC8BQ6P9F7 803 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 BTNL3Q6UXE8 466 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 TMEM184AQ6ZMB5 413 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 Q7L0L9 218 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CEACAM19Q7Z692 300 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF573Q86YE8 665 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 HIPK1Q86Z02 1210 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CBWD2Q8IUF1 395 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 RFESDQ8TAC1 157 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ERMNQ8TAM6 284 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF671Q8TAW3 534 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ART4Q93070 314 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 DNAJA3Q96EY1 480 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 C8orf76Q96K31 380 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 C9orf85Q96MD7 179 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 TSGA13Q96PP4 275 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 VPS35Q96QK1 796 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 MCCC1Q96RQ3 725 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 GPA33Q99795 319 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 THUMPD2Q9BTF0 503 aaKnown RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 TBCDQ9BTW9 1192 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 RPP25Q9BUL9 199 aaKnown RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF416Q9BWM5 594 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 TBC1D10AQ9BXI6 508 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 GPN2Q9H9Y4 310 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 LPAR2Q9HBW0 351 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 AGPAT5Q9NUQ2 364 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 C1orf123Q9NWV4 160 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 DHRS4-AS1Q9P1J3 65 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CTNNA3Q9UI47 895 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 NTNG1Q9Y2I2 539 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ATP6V0A2Q9Y487 856 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 MFHAS1Q9Y4C4 1052 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 AP1M2Q9Y6Q5 423 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 RTL1A6NKG5 1358 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 ATP10AO60312 1499 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 COL5A2P05997 1499 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-205ENST00000391970 PLEKHH2Q8IVE3 1493 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 PLXNC1O60486 1568 aa2.43□□□□□ -2.02
PTPRC-205ENST00000391970 CLIP1P30622 1438 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CPSF1Q10570 1443 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CLASP1Q7Z460 1538 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 DISP1Q96F81 1524 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 KIF21BO75037 1637 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 E9PCH4 1651 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 RB1CC1Q8TDY2 1594 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 TCOF1Q13428 1488 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CECR2Q9BXF3 1484 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CCDC7Q96M83 1385 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 TRAV9-2A0A087WT02 112 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 A0A1B0GWJ7 208 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF840PA6NDX5 716 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 WASHC1A8K0Z3 465 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 PES1O00541 588 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms