RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 STX16-NPEPL1H3BU86 382 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 STX16O14662 325 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 PCDH7O60245 1069 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 OR4F21O95013 312 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 OTCP00480 354 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 RBP1P09455 135 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 PAX1P15863 534 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 CHN1P15882 459 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 PPP3CBP16298 524 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 CDKN1AP38936 164 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 TRA2BP62995 288 aaKnown RBP15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 GANABQ14697 944 aaKnown RBP15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 GUSBP1Q15486 140 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 CTU2Q2VPK5 515 aaKnown RBP15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 HEPHL1Q6MZM0 1159 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 METTL25Q8N6Q8 603 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 ZNF611Q8N823 705 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 CDYL2Q8N8U2 506 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 OR6K3Q8NGY3 331 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 RAB3IL1Q8TBN0 382 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 RNF138Q8WVD3 245 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 BBS4Q96RK4 519 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 REG4Q9BYZ8 158 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 BRF2Q9HAW0 419 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 NMRK1Q9NWW6 199 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 VDAC3Q9Y277 283 aa15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 UTP11Q9Y3A2 253 aaKnown RBP15.94■□□□□ 0.14
PDLIM4-202ENST00000379018 ESPNB1AK53 854 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 RPS17P08708 135 aaKnown RBP15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 OCRLQ01968 901 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 FAPQ12884 760 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 ZNF619Q8N2I2 560 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 TACO1Q9BSH4 297 aaKnown RBP15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 VPS29Q9UBQ0 182 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 MCM8Q9UJA3 840 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 TMCO1Q9UM00 188 aa15.93■□□□□ 0.14
PDLIM4-202ENST00000379018 LINC01387J3KSC0 135 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 FADS1O60427 444 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 COQ9O75208 318 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 IFNA2P01563 188 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 JUNP05412 331 aaKnown RBP15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 ACVR1BP36896 505 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 CLK3P49761 638 aaKnown RBP15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 PSG6Q00889 435 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 BTKQ06187 659 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 TSC22D1Q15714 1073 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 DECR1Q16698 335 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 PODNL1Q6PEZ8 512 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 TMEM107Q6UX40 140 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 ZDHHC24Q6UX98 284 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 OR10D3Q8NH80 312 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 ZNF483Q8TF39 744 aaPredicted RBP15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 SLC9A6Q92581 669 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 NEUROG1Q92886 237 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 ERP27Q96DN0 273 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 TRMT61AQ96FX7 289 aaKnown RBP15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 GMPPAQ96IJ6 420 aaPredicted RBP15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 TBL1XR1Q9BZK7 514 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 TMEM185BQ9H7F4 350 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 SLC35C2Q9NQQ7 365 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 MCTS1Q9ULC4 181 aaKnown RBP15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 ABCG2Q9UNQ0 655 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 AP4B1Q9Y6B7 739 aa15.92■□□□□ 0.14
PDLIM4-202ENST00000379018 MANBAO00462 879 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 SOX30O94993 753 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 SYNGR4O95473 234 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 SOD3P08294 240 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 NCBP2P52298 156 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 PSPHP78330 225 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 RAE1P78406 368 aaKnown RBP15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 CAV1Q03135 178 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 ZNF844Q08AG5 666 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 TEX35Q5T0J7 233 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 UBAP2Q5T6F2 1119 aaKnown RBP15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 GGNQ86UU5 652 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 SAMD14Q8IZD0 417 aaPredicted RBP15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 SPATA4Q8NEY3 305 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 C16orf78Q8WTQ4 265 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 APIPQ96GX9 242 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 FANCFQ9NPI8 374 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 PLSCR4Q9NRQ2 329 aa15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 DMGDHQ9UI17 866 aaKnown RBP15.91■□□□□ 0.14
PDLIM4-202ENST00000379018 TNFSF11O14788 317 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 CXCL13O43927 109 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 PLOD3O60568 738 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 NTN1O95631 604 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 MPIP34949 423 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 IDUAP35475 653 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 ACSM2AQ08AH3 577 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 HEPACAMQ14CZ8 416 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 ACSM2BQ68CK6 577 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 BEND4Q6ZU67 534 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 GALNT10Q86SR1 603 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 STK32CQ86UX6 486 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 GATSQ8NAP1 163 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 FBXW5Q969U6 566 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 S100PBPQ96BU1 408 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 ZBED6CLQ96FA7 236 aaPredicted RBP15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 TMEM204Q9BSN7 226 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 RAB17Q9H0T7 212 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms