RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SORCS2Q96PQ0 1159 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TRBV2A0A0J9YWF9 115 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 J3KR12 359 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 VIPP01282 170 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CD52P31358 61 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 BTG2P78543 158 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZFP90Q8TF47 636 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GGHQ92820 318 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 OSGEPL1Q9H4B0 414 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 NSG1A0A0A6YYJ2 146 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 PRAMEF2O60811 474 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 NR0B1P51843 470 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FNDC3BQ53EP0 1204 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 HSPB11Q9Y547 144 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CDC7O00311 574 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 IFNA1P01562 189 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MARCH8Q5T0T0 291 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SCD5Q86SK9 330 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CIR1Q86X95 450 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FAM156AQ8NDB6 213 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FERD3LQ96RJ6 166 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MOB1AQ9H8S9 216 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 AKIP1Q9NQ31 210 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GK5Q6ZS86 529 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 BEST4Q8NFU0 473 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 LKAAEAR1Q8TD35 194 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FOXD2O60548 495 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SRMP19623 302 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 S100A2P29034 98 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 AGBL4Q5VU57 503 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 BEST3Q8N1M1 668 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 PLK3Q9H4B4 646 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GIMD1P0DJR0 217 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SSTR3P32745 418 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 XCR1P46094 333 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 KCNQ1P51787 676 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MXD1Q05195 221 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FIP1L1Q6UN15 594 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TMPRSS11FQ6ZWK6 438 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 COX18Q8N8Q8 333 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 NANPQ8TBE9 248 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 C7orf34Q96L11 122 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ERVK-18Q9QC07 812 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SLC22A23A1A5C7 686 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CTSEP14091 401 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 AMZ1Q400G9 498 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ANKRD33Q7Z3H0 272 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RDH10Q8IZV5 341 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SYT4Q9H2B2 425 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 STC2O76061 302 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CFHP08603 1231 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 VSX2P58304 361 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 BCL2A1Q16548 175 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CHMP1BQ7LBR1 199 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 KREMEN2Q8NCW0 462 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 BRD7Q9NPI1 651 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MSRAQ9UJ68 235 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 hCG_2014768A0A024R1R8 64 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 TNFP01375 233 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 RABIFP47224 123 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CLEC10AQ8IUN9 316 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM156Q8N614 296 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 TAS2R3Q9NYW6 316 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 COMMD3Q9UBI1 195 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 AJAP1Q9UKB5 411 aaPredicted RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 DGKBQ9Y6T7 804 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 KLK1P06870 262 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CALCRP30988 508 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 GRB7Q14451 532 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CTF1Q16619 201 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 PRAMEF18Q5VWM3 479 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SERPINA12Q8IW75 414 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CAMKK1Q8N5S9 505 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 OR10H5Q8NGA6 315 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 RNASE11Q8TAA1 199 aaKnown RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ARL11Q969Q4 196 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ABI3Q9P2A4 366 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SHOXO15266 292 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 MBP02144 154 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 FOSL1P15407 271 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SDHBP21912 280 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 NCBP2P52298 156 aaKnown RBP eCLIP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 HSD11B2P80365 405 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 MAP4K2Q12851 820 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 HYAL4Q2M3T9 481 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CMKLR1Q99788 373 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 IER2Q9BTL4 223 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 NOX3Q9HBY0 568 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHGC4Q9Y5F7 938 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 OR7A10O76100 309 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ZBTB37Q5TC79 503 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 KLF16Q9BXK1 252 aaPredicted RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 HBE1P02100 147 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 S100PP25815 95 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 TAS2R19P59542 299 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CXCL17Q6UXB2 119 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 IL17RDQ8NFM7 739 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms