RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 ITGB7P26010 798 aa17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 DUS1LQ6P1R4 473 aaKnown RBP17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 FBXO46Q6PJ61 603 aaPredicted RBP17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 CPOQ8IVL8 374 aa17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 CYB561A3Q8NBI2 242 aa17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 FAM71F1Q96KD3 344 aaPredicted RBP17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 CCDC32Q9BV29 185 aa17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 VDAC3Q9Y277 283 aa17.96■□□□□ 0.46
TBC1D4-201ENST00000377625 POLR2HP52434 150 aaKnown RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 SYT14Q8NB59 555 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 GPR150Q8NGU9 434 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 SYNPO2LQ9H987 977 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 BTNL2Q9UIR0 455 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 A0A0A6YYC8 382 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 MEGF11A6BM72 1044 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 I3L1I5 382 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CRTAPO75718 401 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 COMTD1Q86VU5 262 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 VWA5B2Q8N398 1253 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 ZMYND19Q96E35 227 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 MAP3K3Q99759 626 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 ZNF160Q9HCG1 818 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 STARD5Q9NSY2 213 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 LTN1O94822 1766 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CD79AP11912 226 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 IL4RP24394 825 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 EMP2P54851 167 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 GSCP56915 257 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 ARL6IP1Q15041 203 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 NADSYN1Q6IA69 706 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 GPR26Q8NDV2 337 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CDCA3Q99618 268 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 ALG8Q9BVK2 526 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 PINK1Q9BXM7 581 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 PAQR5Q9NXK6 330 aaPredicted RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 PCDHGA7Q9Y5G6 932 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 A0A1B0GV50 99 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 C12orf71A8MTZ7 269 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 OR8U9P0C7N5 309 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CAMLGP49069 296 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 TP53I3Q53FA7 332 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 OR9K2Q8NGE7 335 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 NLKQ9UBE8 527 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 ACAD8Q9UKU7 415 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 B3GNT3Q9Y2A9 372 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 SMAD6O43541 496 aaKnown RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CEBPBP17676 345 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 DAP3P51398 398 aaKnown RBP17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CHFRQ96EP1 664 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 TMEM246Q9BRR3 403 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 CD207Q9UJ71 328 aa17.95■□□□□ 0.46
TBC1D4-201ENST00000377625 MPPED1O15442 326 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 RETP07949 1114 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 CHMP24386 653 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 HSD11B1LQ7Z5J1 315 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 SFXN5Q8TD22 340 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 A6NIZ1 184 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 F5H5K5 113 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 RNASET2O00584 256 aaKnown RBP17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 FUT1P19526 365 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 APLNRP35414 380 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 CLDN2P57739 230 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 RAP1BP61224 184 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 RAP1AP62834 184 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 SLC22A10Q63ZE4 541 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 DPPA4Q7L190 304 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 CCDC28AQ8IWP9 274 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 ZFAND2BQ8WV99 257 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 NEIL2Q969S2 332 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 KLHL13Q9P2N7 655 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 TVP23AA6NH52 213 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 YY2O15391 372 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 TAP2Q03519 686 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 TUBB3Q13509 450 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 KIR2DS3Q14952 304 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 PAGE3Q5JUK9 113 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 MRPL21Q7Z2W9 205 aaKnown RBP17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 PNPLA1Q8N8W4 532 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 KDM1BQ8NB78 822 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 TRUB1Q8WWH5 349 aaKnown RBP17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 SDR39U1Q9NRG7 319 aaPredicted RBP17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 RAD1O60671 282 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 LILRB3O75022 631 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 BMP2P12643 396 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 FXYD4P59646 89 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 PLGLAQ15195 96 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 LILRB2Q8N423 598 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 CHDHQ8NE62 594 aaPredicted RBP17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 MDGA1Q8NFP4 955 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 HHIPQ96QV1 700 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 GSTO2Q9H4Y5 243 aa17.94■□□□□ 0.46
TBC1D4-201ENST00000377625 PENKP01210 267 aaPredicted RBP17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 PABPC4LP0CB38 370 aaKnown RBP17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 CCDC71LQ8N9Z2 235 aa17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 C17orf50Q8WW18 174 aa17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 TANKQ92844 425 aa17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 BIRC8Q96P09 236 aa17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 PBDC1Q9BVG4 233 aa17.93■□□□□ 0.46
TBC1D4-201ENST00000377625 PAPOLGQ9BWT3 736 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms