RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TFF3Q07654 80 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 STX3Q13277 289 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 LSM12Q3MHD2 195 aaKnown RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 NSUN5P2Q63ZY6 315 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 OR5M10Q6IEU7 315 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 MFSD12Q6NUT3 480 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 ACBD4Q8NC06 268 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 OR5P2Q8WZ92 322 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 PIK3R3Q92569 461 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 JADE3Q92613 823 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 ZBTB9Q96C00 473 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 FAM120BQ96EK7 910 aaKnown RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 WDYHV1Q96HA8 205 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 SFXN2Q96NB2 322 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 TBL1XR1Q9BZK7 514 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 TRIM8Q9BZR9 551 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 BHLHE41Q9C0J9 482 aaPredicted RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 ZNF395Q9H8N7 513 aaPredicted RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 HHATLQ9HCP6 504 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 ZCCHC3Q9NUD5 404 aaKnown RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 HAO1Q9UJM8 370 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 SNX8Q9Y5X2 465 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 MED12Q93074 2177 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 LRBAP50851 2863 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 GXYLT2A0PJZ3 443 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 CD8B2A6NJW9 211 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 H0Y3Z8 333 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 DVL2O14641 736 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 FADS1O60427 444 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 UTS2O95399 124 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 IL2RAP01589 272 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 ALOX5P09917 674 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 ACP2P11117 423 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 G6PDP11413 515 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 SSTR2P30874 369 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 MAP3K8P41279 467 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 GFRA1P56159 465 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 C21orf58P58505 322 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 STX5Q13190 355 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 MPP2Q14168 576 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 KRTCAP2Q8N6L1 136 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 COX18Q8N8Q8 333 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 FADS6Q8N9I5 356 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 OR56A1Q8NGH5 318 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 FBXO30Q8TB52 745 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 ZPLD1Q8TCW7 415 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 PPP1R36Q96LQ0 422 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 TRIB1Q96RU8 372 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 SORT1Q99523 831 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 TREX2Q9BQ50 279 aaPredicted RBP15.28■□□□□ 0.04
HMGN4-201ENST00000377575 C20orf27Q9GZN8 174 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 PTGES2Q9H7Z7 377 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 CALHM2Q9HA72 323 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 NPDC1Q9NQX5 325 aaPredicted RBP15.28■□□□□ 0.04
HMGN4-201ENST00000377575 SIRT3Q9NTG7 399 aaPredicted RBP15.28■□□□□ 0.04
HMGN4-201ENST00000377575 FLRT3Q9NZU0 649 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 DCHS2Q6V1P9 2916 aa15.28■□□□□ 0.04
HMGN4-201ENST00000377575 NUP214P35658 2090 aaPredicted RBP15.28■□□□□ 0.04
HMGN4-201ENST00000377575 KIAA1549Q9HCM3 1950 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 TMEM120BA0PK00 339 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 KRT16P08779 473 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 CPN1P15169 458 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 IGFBP2P18065 325 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 CHMP24386 653 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 LCN1P31025 176 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 CLDN8P56748 225 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 BST1Q10588 318 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.27■□□□□ 0.045e-12■■■■□ 23.1
HMGN4-201ENST00000377575 GRAMD1BQ3KR37 738 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 SPDYE7PQ495Y7 208 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 SEM1Q6ZVN7 128 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 CAMKMTQ7Z624 323 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 TRIM42Q8IWZ5 723 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 RIMKLAQ8IXN7 391 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 LRRC34Q8IZ02 419 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 SLC16A11Q8NCK7 471 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 TNIP2Q8NFZ5 429 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 OR2M3Q8NG83 312 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 PSMA8Q8TAA3 256 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 SFXN5Q8TD22 340 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 MOAP1Q96BY2 351 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 COQ8BQ96D53 544 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 CHMP6Q96FZ7 201 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 STACQ99469 402 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 G6PC3Q9BUM1 346 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 DUSP26Q9BV47 211 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 DSN1Q9H410 356 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 AKTIPQ9H8T0 292 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 SLC24A3Q9HC58 644 aa15.27■□□□□ 0.04
HMGN4-201ENST00000377575 MBD3L4A6NDZ8 208 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 MBD3L3A6NE82 208 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 MBD3L5A6NJ08 208 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 CFLARO15519 480 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 KCNK2O95069 426 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 C6orf47O95873 294 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 IGKV1D-16P01601 117 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 HMGN2P05204 90 aaKnown RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 NGFRP08138 427 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 CEACAM8P31997 349 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms