RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TSSK3Q96PN8 268 aa17.35■□□□□ 0.37
CBWD3-204ENST00000377349 YIPF4Q9BSR8 244 aa17.35■□□□□ 0.37
CBWD3-204ENST00000377349 STMN4Q9H169 189 aaPredicted RBP17.35■□□□□ 0.37
CBWD3-204ENST00000377349 C1orf109Q9NX04 203 aa17.35■□□□□ 0.37
CBWD3-204ENST00000377349 SIRT5Q9NXA8 310 aa17.35■□□□□ 0.37
CBWD3-204ENST00000377349 TAS2R10Q9NYW0 307 aa17.35■□□□□ 0.37
CBWD3-204ENST00000377349 SLC17A7Q9P2U7 560 aa17.35■□□□□ 0.37
CBWD3-204ENST00000377349 SH3D21A4FU49 640 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 C17orf51A8MQB3 221 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 PDPK1O15530 556 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 GMFGO60234 142 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 CLDN18P56856 261 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 ZCCHC23Q6ZST2 131 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 ZNF551Q7Z340 670 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-204ENST00000377349 PLCZ1Q86YW0 608 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 CIDECQ96AQ7 238 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-204ENST00000377349 SLC35A4Q96G79 324 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 AMDHD1Q96NU7 426 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 TM9SF2Q99805 663 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 PPP4R1LQ9P1A2 415 aa17.34■□□□□ 0.37
CBWD3-204ENST00000377349 USF3Q68DE3 2245 aa17.33■□□□□ 0.37
CBWD3-204ENST00000377349 PLOD2O00469 737 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 SIAH2O43255 324 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 HCRTR2O43614 444 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 TSPAN2O60636 221 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 CHRNGP07510 517 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 GRK2P25098 689 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 ALDH3A1P30838 453 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 SRD5A2P31213 254 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 PRKAG1P54619 331 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 GAS1P54826 345 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 MRPS22P82650 360 aaKnown RBP17.33■□□□□ 0.36
CBWD3-204ENST00000377349 ENPP6Q6UWR7 440 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 IKBIPQ70UQ0 350 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 BIVMQ86UB2 503 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 OR2T11Q8NH01 316 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 FAM76AQ8TAV0 307 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 FBXO30Q8TB52 745 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 SMPDL3BQ92485 455 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 SFXN2Q96NB2 322 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 SH3BP4Q9P0V3 963 aa17.33■□□□□ 0.36
CBWD3-204ENST00000377349 A8MXE2 369 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 UPK1AO00322 258 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 ZIC3O60481 467 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 TGM6O95932 706 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 NEFHP12036 1026 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 ZNF708P17019 499 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 EFNA1P20827 205 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-204ENST00000377349 EVI2BP34910 448 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 DECR1Q16698 335 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 KANK2Q63ZY3 851 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 TRABD2AQ86V40 505 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 RIBC1Q8N443 379 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-204ENST00000377349 BANPQ8N9N5 519 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 ZBTB9Q96C00 473 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 PPCDCQ96CD2 204 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 C18orf12Q96KH6 178 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 Q9N2J8 555 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 BEX4Q9NWD9 120 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-204ENST00000377349 FLRT3Q9NZU0 649 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 BAIAP2L1Q9UHR4 511 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 C19orf53Q9UNZ5 99 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-204ENST00000377349 TESMINQ9Y4I5 508 aa17.32■□□□□ 0.36
CBWD3-204ENST00000377349 RTTNQ86VV8 2226 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 A0A087WV62 115 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 A0A1W2PNV4 684 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 SDC1P18827 310 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 DPP4P27487 766 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 CPA2P48052 419 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 PNLIPRP2P54317 469 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 B3GALT5-AS1P59052 145 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 PSG6Q00889 435 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 LTBQ06643 244 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 Q71RC1 249 aaPredicted RBP17.31■□□□□ 0.36
CBWD3-204ENST00000377349 GALNT10Q86SR1 603 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.31■□□□□ 0.36
CBWD3-204ENST00000377349 TWIST2Q8WVJ9 160 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 ELP4Q96EB1 424 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 DTNBP1Q96EV8 351 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 CHMP6Q96FZ7 201 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 TRMOQ9BU70 441 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 PIGMQ9H3S5 423 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 EML4Q9HC35 981 aaKnown RBP17.31■□□□□ 0.36
CBWD3-204ENST00000377349 NEUROD4Q9HD90 331 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 GIMAP2Q9UG22 337 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 MRPS18CQ9Y3D5 142 aaKnown RBP17.31■□□□□ 0.36
CBWD3-204ENST00000377349 CCL27Q9Y4X3 112 aa17.31■□□□□ 0.36
CBWD3-204ENST00000377349 PIP5K1BO14986 540 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 SLITRK5O94991 958 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 NUDT17P0C025 328 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 CHMP24386 653 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 GABRA3P34903 492 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 PSPHP78330 225 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 GAB1Q13480 694 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 ARL13AQ5H913 290 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 RAET1LQ5VY80 246 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 AAGABQ6PD74 315 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 UBQLNLQ8IYU4 475 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 OR2L13Q8N349 312 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 ZFP28Q8NHY6 868 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms