RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 KCT2Q8NC54 265 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 OR4A15Q8NGL6 344 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 OR4C15Q8NGM1 316 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.55□□□□□ -0.56
VRK3-202ENST00000377011 APH1BQ8WW43 257 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 DPH2Q9BQC3 489 aaPredicted RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 NDC1Q9BTX1 674 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 GPR87Q9BY21 358 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 AICDAQ9GZX7 198 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 RUBCNLQ9H714 662 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 MYNNQ9NPC7 610 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 ZNF71Q9NQZ8 489 aaPredicted RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 PSORS1C1Q9UIG5 152 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 OSGIN1Q9UJX0 560 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 ERVK-11Q9UQG0 969 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 LYVE1Q9Y5Y7 322 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 NBASA2RRP1 2371 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 A0A1B0GX78 115 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 OR2W5A6NFC9 320 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 ARGFXA6NJG6 315 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 C4orf51C9J302 202 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 TNFRSF11BO00300 401 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 DSCR3O14972 297 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 TNFRSF21O75509 655 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 RAB40ALP0C0E4 278 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 RRM2P31350 389 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 PIK3CBP42338 1070 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 CRYBA2P53672 197 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 RPS15P62841 145 aaKnown RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 MAT1AQ00266 395 aaKnown RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 GAB1Q13480 694 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 GRM7Q14831 915 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 ZNF630Q2M218 657 aaPredicted RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 TRIM40Q6P9F5 258 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 LCTLQ6UWM7 567 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 IKBIPQ70UQ0 350 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 UBE2E3Q969T4 207 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 EFHD2Q96C19 240 aaPredicted RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 LGALS12Q96DT0 336 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 TPD52L3Q96J77 140 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 SPSB2Q99619 263 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 MMP27Q9H306 513 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 SNX7Q9UNH6 387 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 PTRH2Q9Y3E5 179 aaKnown RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 DOCK10Q96BY6 2186 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 A0A0A6YYC8 382 aaPredicted RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 SAGE2PA6NJ88 616 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 TMEM229AB2RXF0 380 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 I3L1I5 382 aaPredicted RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 SRPX2O60687 465 aaPredicted RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 DIRAS1O95057 198 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 CD36P16671 472 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 OTX2P32243 289 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 TMED10P49755 219 aaKnown RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 PPP5CP53041 499 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 MVDP53602 400 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 OLR1P78380 273 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 ABATP80404 500 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 DDX39BQ13838 428 aaKnown RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 LAPTM4AQ15012 233 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 INAQ16352 499 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 VWA2Q5GFL6 755 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 CRB2Q5IJ48 1285 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 HIST2H2AA3Q6FI13 130 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 PPP1R32Q7Z5V6 425 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 NATD1Q8N6N6 113 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 AMER3Q8N944 861 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 ANKRD53Q8N9V6 530 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 RHOXF1Q8NHV9 184 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 C9orf43Q8TAL5 461 aaPredicted RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 GEMIN6Q8WXD5 167 aaKnown RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 ABHD17AQ96GS6 310 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 COPS4Q9BT78 406 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 BTBD2Q9BX70 525 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 SLIRPQ9GZT3 109 aaKnown RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 SP140LQ9H930 580 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 TMEM184CQ9NVA4 438 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 NDUFAF4Q9P032 175 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 RNF6Q9Y252 685 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 WBP11Q9Y2W2 641 aaKnown RBP11.54□□□□□ -0.56
VRK3-202ENST00000377011 DYRK1BQ9Y463 629 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 UGT2A1Q9Y4X1 527 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 COL12A1Q99715 3063 aa11.54□□□□□ -0.56
VRK3-202ENST00000377011 BAHCC1Q9P281 2608 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 GNG14A0A1W2PPG7 69 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 CLCA1A8K7I4 914 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 EFCAB9A8MZ26 197 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 MPZL2O60487 215 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 GCM2O75603 506 aaPredicted RBP11.53□□□□□ -0.56
VRK3-202ENST00000377011 ETHE1O95571 254 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 KRT75O95678 551 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 ONECUT2O95948 504 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 CDK1P06493 297 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 DDX5P17844 614 aaKnown RBP11.53□□□□□ -0.56
VRK3-202ENST00000377011 HMGA2P52926 109 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 MICAQ29983 383 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms