RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 DOCK7Q96N67 2140 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 A0A1W2PNV4 684 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 TLDC2A0PJX2 215 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 SH3D21A4FU49 640 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 SLC22A20A6NK97 555 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 SLC28A1O00337 649 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 AZIN1O14977 448 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 RAF1P04049 648 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 IFI6P09912 130 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 KLK2P20151 261 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 CPOXP36551 454 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 KEAP1Q14145 624 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 GANABQ14697 944 aaKnown RBP19.02■□□□□ 0.64
VSX1-201ENST00000376707 OR2A2Q6IF42 318 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 HOMEZQ8IX15 550 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 AENQ8WTP8 325 aaKnown RBP19.02■□□□□ 0.64
VSX1-201ENST00000376707 MBD6Q96DN6 1003 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 ZNF764Q96H86 408 aaPredicted RBP19.02■□□□□ 0.64
VSX1-201ENST00000376707 EGLN2Q96KS0 407 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 FCRL1Q96LA6 429 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 IQCGQ9H095 443 aaKnown RBP19.02■□□□□ 0.64
VSX1-201ENST00000376707 C3orf14Q9HBI5 128 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 C1orf109Q9NX04 203 aa19.02■□□□□ 0.64
VSX1-201ENST00000376707 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 A8MXE2 369 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 RGS14O43566 566 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 DIAPH2O60879 1101 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 TNFSF13O75888 250 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 SMNDC1O75940 238 aaKnown RBP eCLIP19.01■□□□□ 0.63
VSX1-201ENST00000376707 IL33O95760 270 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 CRHP06850 196 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 EEFSECP57772 596 aaKnown RBP19.01■□□□□ 0.63
VSX1-201ENST00000376707 HSPB3Q12988 150 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 KANK2Q63ZY3 851 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 Q6ZSR9 355 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 MARCH3Q86UD3 253 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 DUSP19Q8WTR2 217 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 GFM2Q969S9 779 aaKnown RBP19.01■□□□□ 0.63
VSX1-201ENST00000376707 LMF2Q9BU23 707 aaKnown RBP19.01■□□□□ 0.63
VSX1-201ENST00000376707 TBL1XR1Q9BZK7 514 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 ROPN1BQ9BZX4 212 aaPredicted RBP19.01■□□□□ 0.63
VSX1-201ENST00000376707 ROPN1Q9HAT0 212 aaPredicted RBP19.01■□□□□ 0.63
VSX1-201ENST00000376707 LRTM1Q9HBL6 345 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 EQTNQ9NQ60 294 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 NDRG3Q9UGV2 375 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 PTGDR2Q9Y5Y4 395 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 AKAP6Q13023 2319 aa19.01■□□□□ 0.63
VSX1-201ENST00000376707 ITPR3Q14573 2671 aa19■□□□□ 0.63
VSX1-201ENST00000376707 MTORP42345 2549 aa19■□□□□ 0.63
VSX1-201ENST00000376707 TTC36A6NLP5 189 aa19■□□□□ 0.63
VSX1-201ENST00000376707 LINC01387J3KSC0 135 aa19■□□□□ 0.63
VSX1-201ENST00000376707 MSTNO14793 375 aa19■□□□□ 0.63
VSX1-201ENST00000376707 CASKO14936 926 aa19■□□□□ 0.63
VSX1-201ENST00000376707 PDPK1O15530 556 aa19■□□□□ 0.63
VSX1-201ENST00000376707 KCNH1O95259 989 aa19■□□□□ 0.63
VSX1-201ENST00000376707 FGF4P08620 206 aa19■□□□□ 0.63
VSX1-201ENST00000376707 NEFHP12036 1026 aa19■□□□□ 0.63
VSX1-201ENST00000376707 GABRA3P34903 492 aa19■□□□□ 0.63
VSX1-201ENST00000376707 GPC1P35052 558 aa19■□□□□ 0.63
VSX1-201ENST00000376707 POU4F3Q15319 338 aa19■□□□□ 0.63
VSX1-201ENST00000376707 EMBQ6PCB8 327 aa19■□□□□ 0.63
VSX1-201ENST00000376707 ZNF551Q7Z340 670 aaPredicted RBP19■□□□□ 0.63
VSX1-201ENST00000376707 CNEP1R1Q8N9A8 125 aa19■□□□□ 0.63
VSX1-201ENST00000376707 OR2T11Q8NH01 316 aa19■□□□□ 0.63
VSX1-201ENST00000376707 CCT7Q99832 543 aa19■□□□□ 0.63
VSX1-201ENST00000376707 RTN4RQ9BZR6 473 aa19■□□□□ 0.63
VSX1-201ENST00000376707 TUBB1Q9H4B7 451 aa19■□□□□ 0.63
VSX1-201ENST00000376707 FIS1Q9Y3D6 152 aa19■□□□□ 0.63
VSX1-201ENST00000376707 ZNF337Q9Y3M9 751 aa19■□□□□ 0.63
VSX1-201ENST00000376707 DNAJC15Q9Y5T4 150 aa19■□□□□ 0.63
VSX1-201ENST00000376707 SETD2Q9BYW2 2564 aaPredicted RBP18.99■□□□□ 0.63
VSX1-201ENST00000376707 SEC14L5O43304 696 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 NPHS1O60500 1241 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 ATE1O95260 518 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 UTS2O95399 124 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 HRGP04196 525 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 PRPS2P11908 318 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 ALDH3A1P30838 453 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 ANKRD26P1Q6NSI1 321 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 WDR93Q6P2C0 686 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 OR5M1Q8NGP8 315 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 ZFP28Q8NHY6 868 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 CAVIN3Q969G5 261 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 C1GALT1C1Q96EU7 318 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 FAM111AQ96PZ2 611 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 PIGQQ9BRB3 760 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 PLEKHF2Q9H8W4 249 aa18.99■□□□□ 0.63
VSX1-201ENST00000376707 PRRC2AP48634 2157 aaKnown RBP18.99■□□□□ 0.63
VSX1-201ENST00000376707 OR2M5A3KFT3 312 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 H3BML4 177 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 TBX19O60806 448 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 TNFRSF21O75509 655 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 CHEK2O96017 543 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 IFFO1Q0D2I5 559 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 C17orf67Q0P5P2 114 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 DEFB113Q30KQ7 82 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 UGT3A2Q3SY77 523 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 VPS26BQ4G0F5 336 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 GPR151Q8TDV0 419 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 FIG4Q92562 907 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms