RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 DEDD2Q8WXF8 326 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 MS4A4EQ96PG1 132 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 HERPUD2Q9BSE4 406 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 GPR174Q9BXC1 333 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 TNFSF12O43508 249 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 JUNDP17535 347 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 NKPD1Q17RQ9 610 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 FNDC9Q8TBE3 224 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 FNDC8Q8TC99 324 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SPHARQ15513 63 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 MANEALQ5VSG8 457 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 DTX3Q8N9I9 347 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 PGAP3Q96FM1 320 aaPredicted RBP11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 PFKMP08237 780 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 GCH1P30793 250 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 GPR50Q13585 617 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 RHEBL1Q8TAI7 183 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SORCS1Q8WY21 1168 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 OR5B2Q96R09 309 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 PCDHB10Q9UN67 800 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 TEX51A0A1B0GUA7 166 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 RFPL2O75678 378 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 UBL4AP11441 157 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ARL6IP1Q15041 203 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 TMEM201Q5SNT2 666 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 TIFABQ6ZNK6 161 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 LRIG1Q96JA1 1093 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 PLCXD1Q9NUJ7 323 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 RARRES3Q9UL19 164 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 DRD2P14416 443 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 CD6P30203 668 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 COQ5Q5HYK3 327 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF461Q8TAF7 563 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 FRS2Q8WU20 508 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ZFAND2BQ8WV99 257 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF419Q96HQ0 510 aaPredicted RBP11.84□□□□□ -0.51
VPS13A-204ENST00000376634 LMF1Q96S06 567 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 GPATCH2Q9NW75 528 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ALDOBP05062 364 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ERVK-25P63136 954 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ADARB1P78563 741 aaKnown RBP11.84□□□□□ -0.51
VPS13A-204ENST00000376634 TLE1Q04724 770 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 FZD8Q9H461 694 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 FBXO7Q9Y3I1 522 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 EP300Q09472 2414 aaPredicted RBP11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ARPC5O15511 151 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 AQP2P41181 271 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 CES4AQ5XG92 561 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 TLDC1Q6P9B6 456 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 OR4K15Q8NH41 348 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 HUS1BQ8NHY5 278 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SALL4Q9UJQ4 1053 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 IGLON5A6NGN9 336 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SNAPINO95295 136 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SLAMF9Q96A28 289 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ALG8Q9BVK2 526 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SCN5AQ14524 2016 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 HTR3BO95264 441 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 UGT2B7P16662 529 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ARG2P78540 354 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 METTL11BQ5VVY1 283 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 GOLM1Q8NBJ4 401 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SLC35B2Q8TB61 432 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 MAP3K3Q99759 626 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 SUSD2Q9UGT4 822 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 ACAD8Q9UKU7 415 aa11.84□□□□□ -0.51
VPS13A-204ENST00000376634 RNF212BA8MTL3 300 aa11.83□□□□□ -0.51
VPS13A-204ENST00000376634 SULT1B1O43704 296 aa11.83□□□□□ -0.51
VPS13A-204ENST00000376634 DPH7Q9BTV6 452 aa11.83□□□□□ -0.51
VPS13A-204ENST00000376634 RBM24Q9BX46 236 aaKnown RBP11.83□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF160Q9HCG1 818 aa11.83□□□□□ -0.51
VPS13A-204ENST00000376634 FAM118AQ9NWS6 357 aa11.83□□□□□ -0.51
VPS13A-204ENST00000376634 KCTD3Q9Y597 815 aa11.83□□□□□ -0.51
VPS13A-204ENST00000376634 JRKO75564 520 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 TPT1P13693 172 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 SYN1P17600 705 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 CD53P19397 219 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 HNF1BP35680 557 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 TAS2R38P59533 333 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 RPL23AP62750 156 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 HABP2Q14520 560 aaPredicted RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 METTL2BQ6P1Q9 378 aaKnown RBP11.83□□□□□ -0.52
VPS13A-204ENST00000376634 ASRGL1Q7L266 308 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 HDHD5Q9BXW7 423 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 FBRSQ9HAH7 460 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 KCNJ16Q9NPI9 418 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 ZDHHC18Q9NUE0 388 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 RAB3AP20336 220 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 CERS1P27544 350 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 IQCF1Q8N6M8 205 aa11.83□□□□□ -0.52
VPS13A-204ENST00000376634 ACTRT3Q9BYD9 372 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms