RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CD8BP10966 210 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 ADRB3P13945 408 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 ZP3P21754 424 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SMSP52788 366 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SEC13P55735 322 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 LRRC74AQ0VAA2 488 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 IL20RBQ6UXL0 311 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 DEF8Q6ZN54 512 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 LHFPL3Q86UP9 236 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 NR2C2APQ86WQ0 139 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SRFBP1Q8NEF9 429 aaKnown RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 OR6M1Q8NGM8 313 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 OTULINQ96BN8 352 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 COQ10AQ96MF6 247 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SGK2Q9HBY8 427 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 FGF20Q9NP95 211 aaPredicted RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 ISYNA1Q9NPH2 558 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 hCG_1807616A0A1W2PRN6 198 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 ARHGEF33A8MVX0 844 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 EEF1E1O43324 174 aaKnown RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 H1F0P07305 194 aaKnown RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 TIA1P31483 386 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■■■□ 19.4
MSH5-204ENST00000375755 SOAT1P35610 550 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
MSH5-204ENST00000375755 RPL6Q02878 288 aaKnown RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 RUNX3Q13761 415 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 ZNF273Q14593 569 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 PRSS53Q2L4Q9 553 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 NDUFAF5Q5TEU4 345 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 KRT74Q7RTS7 529 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 ZNF485Q8NCK3 441 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 BEST4Q8NFU0 473 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 OR4D11Q8NGI4 311 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SLC7A13Q8TCU3 470 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 WFIKKN2Q8TEU8 576 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 DTD2Q96FN9 168 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 OR2M2Q96R28 347 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SLC6A17Q9H1V8 727 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 REEP4Q9H6H4 257 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 SYNDIG1Q9H7V2 258 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 MCCC2Q9HCC0 563 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 LYARQ9NX58 379 aaKnown RBP12.12□□□□□ -0.47
MSH5-204ENST00000375755 SERGEFQ9UGK8 458 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 ATP6V1HQ9UI12 483 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 MAB21L2Q9Y586 359 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 RNF215Q9Y6U7 377 aa12.12□□□□□ -0.47
MSH5-204ENST00000375755 GPR171O14626 319 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 ACP2P11117 423 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 AHCYP23526 432 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 SLC25A30Q5SVS4 291 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 NLNQ9BYT8 704 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 PRSS16Q9NQE7 514 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
MSH5-204ENST00000375755 CLCA2Q9UQC9 943 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 MEIKINA0A087WXM9 373 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 GFYI3L273 518 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 TOXO94900 526 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 TCRBP04435 133 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 POU2F2P09086 479 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 CELP19835 753 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 KELP23276 732 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 GDI1P31150 447 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 GIPRP48546 466 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 EFNB1P98172 346 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 CNTN1Q12860 1018 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 ZDHHC20Q5W0Z9 365 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 GPR135Q8IZ08 494 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 OR8D1Q8WZ84 308 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 SAP130Q9H0E3 1048 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 SDHAF2Q9NX18 166 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 FBXW2Q9UKT8 454 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 PPIEQ9UNP9 301 aaKnown RBP12.11□□□□□ -0.47
MSH5-204ENST00000375755 GPR52Q9Y2T5 361 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 COL6A3P12111 3177 aa12.11□□□□□ -0.47
MSH5-204ENST00000375755 EDDM13A0A1B0GTR0 161 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 G3V3Q6 166 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 KAT7O95251 611 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 PRNPP04156 253 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 EIF4EP06730 217 aaKnown RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 P2RY2P41231 377 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 RPS26P62854 115 aaKnown RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 RAB40BQ12829 278 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 ST3GAL2Q16842 350 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 KANSL1Q7Z3B3 1105 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 THOC6Q86W42 341 aaKnown RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 OR8D4Q8NGM9 314 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 KLK6Q92876 244 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 UBL7Q96S82 380 aaPredicted RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 GPA33Q99795 319 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 DPAGT1Q9H3H5 408 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 CYSLTR2Q9NS75 346 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 GPR37L1O60883 481 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 SULT1A3P0DMM9 295 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 SULT1A4P0DMN0 295 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 HSD3B1P14060 373 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms